diff options
| author |   Mike Gilbert <floppym@gentoo.org> | 2014-06-30 04:27:29 +0000 |
|---|---|---|
| committer | Mike Gilbert <floppym@gentoo.org> | 2014-06-30 04:27:29 +0000 |
| commit | d6547493506ff49cf23d8df18de721652a96d502 (patch) | |
| tree | b0688fffaac849d9ff30d65d4e82b67a543f03c4 /sci-biology/pysam | |
| parent | Depend on setuptools. (diff) | |
| download | gentoo-2-d6547493506ff49cf23d8df18de721652a96d502.tar.gz gentoo-2-d6547493506ff49cf23d8df18de721652a96d502.tar.bz2 gentoo-2-d6547493506ff49cf23d8df18de721652a96d502.zip | |
Convert to distutils-r1. Depend on setuptools.
(Portage version: 2.2.10/cvs/Linux x86_64, signed Manifest commit with key 0BBEEA1FEA4843A4)
Diffstat (limited to 'sci-biology/pysam')
| -rw-r--r-- | sci-biology/pysam/ChangeLog | 11 | ||||
| -rw-r--r-- | sci-biology/pysam/pysam-0.6-r1.ebuild | 24 | ||||
| -rw-r--r-- | sci-biology/pysam/pysam-0.6.ebuild | 19 |
3 files changed, 32 insertions, 22 deletions
diff --git a/sci-biology/pysam/ChangeLog b/sci-biology/pysam/ChangeLog index 595c359ae60e..3ff678500d52 100644 --- a/sci-biology/pysam/ChangeLog +++ b/sci-biology/pysam/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/pysam -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/ChangeLog,v 1.3 2013/03/11 16:50:14 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/ChangeLog,v 1.4 2014/06/30 04:27:29 floppym Exp $ + +*pysam-0.6-r1 (30 Jun 2014) + + 30 Jun 2014; Mike Gilbert <floppym@gentoo.org> +pysam-0.6-r1.ebuild, + -pysam-0.6.ebuild: + Convert to distutils-r1. Depend on setuptools. 11 Mar 2013; Justin Lecher <jlec@gentoo.org> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly @@ -13,4 +19,3 @@ 29 Jan 2012; Andrey Kislyuk <weaver@gentoo.org> +pysam-0.6.ebuild, +metadata.xml: New package, ebuild written by me - diff --git a/sci-biology/pysam/pysam-0.6-r1.ebuild b/sci-biology/pysam/pysam-0.6-r1.ebuild new file mode 100644 index 000000000000..9db2aad912f4 --- /dev/null +++ b/sci-biology/pysam/pysam-0.6-r1.ebuild @@ -0,0 +1,24 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/pysam-0.6-r1.ebuild,v 1.1 2014/06/30 04:27:29 floppym Exp $ + +EAPI="5" +PYTHON_COMPAT=( python2_7 ) + +inherit distutils-r1 + +DESCRIPTION="Python interface for the SAM/BAM sequence alignment and mapping format" +HOMEPAGE="http://code.google.com/p/pysam http://pypi.python.org/pypi/pysam" +SRC_URI="http://${PN}.googlecode.com/files/${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="dev-python/setuptools[${PYTHON_USEDEP}]" + +python_compile() { + python_is_python3 || local -x CFLAGS="${CFLAGS} -fno-strict-aliasing" + distutils-r1_python_compile +} diff --git a/sci-biology/pysam/pysam-0.6.ebuild b/sci-biology/pysam/pysam-0.6.ebuild deleted file mode 100644 index 664245fb580c..000000000000 --- a/sci-biology/pysam/pysam-0.6.ebuild +++ /dev/null @@ -1,19 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/pysam-0.6.ebuild,v 1.2 2012/02/25 02:56:39 patrick Exp $ - -EAPI="3" -PYTHON_DEPEND="2" -SUPPORT_PYTHON_ABIS="1" -RESTRICT_PYTHON_ABIS="3.* 2.5 2.7-pypy-* *-jython" - -inherit distutils - -DESCRIPTION="Python interface for the SAM/BAM sequence alignment and mapping format" -HOMEPAGE="http://code.google.com/p/${PN} http://pypi.python.org/pypi/${PN}" -SRC_URI="http://${PN}.googlecode.com/files/${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" |