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author | Justin Lecher <jlec@gentoo.org> | 2014-01-06 12:00:45 +0000 |
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committer | Justin Lecher <jlec@gentoo.org> | 2014-01-06 12:00:45 +0000 |
commit | 365b1ca0a30cc05aa2734b2a5f2aca21c34e6b9c (patch) | |
tree | 31e7953c66ba61334044a2a76075f3f7c264b71c /sci-chemistry/aria | |
parent | Version bump, drop old (diff) | |
download | gentoo-2-365b1ca0a30cc05aa2734b2a5f2aca21c34e6b9c.tar.gz gentoo-2-365b1ca0a30cc05aa2734b2a5f2aca21c34e6b9c.tar.bz2 gentoo-2-365b1ca0a30cc05aa2734b2a5f2aca21c34e6b9c.zip |
sci-chemistry/aria: Drop old; punt base.eclass
(Portage version: 2.2.8/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-chemistry/aria')
-rw-r--r-- | sci-chemistry/aria/ChangeLog | 8 | ||||
-rw-r--r-- | sci-chemistry/aria/aria-2.3.2-r4.ebuild | 88 | ||||
-rw-r--r-- | sci-chemistry/aria/aria-2.3.2-r5.ebuild | 89 | ||||
-rw-r--r-- | sci-chemistry/aria/aria-2.3.2_p20130826.ebuild | 6 |
4 files changed, 9 insertions, 182 deletions
diff --git a/sci-chemistry/aria/ChangeLog b/sci-chemistry/aria/ChangeLog index bc0b8fc5cfd9..525718cb9554 100644 --- a/sci-chemistry/aria/ChangeLog +++ b/sci-chemistry/aria/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/aria -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.21 2013/10/09 14:36:29 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.22 2014/01/06 12:00:45 jlec Exp $ + + 06 Jan 2014; Justin Lecher <jlec@gentoo.org> -aria-2.3.2-r4.ebuild, + -aria-2.3.2-r5.ebuild, aria-2.3.2_p20130826.ebuild: + Drop old; punt base.eclass *aria-2.3.2_p20130826 (09 Oct 2013) diff --git a/sci-chemistry/aria/aria-2.3.2-r4.ebuild b/sci-chemistry/aria/aria-2.3.2-r4.ebuild deleted file mode 100644 index 0501be72de86..000000000000 --- a/sci-chemistry/aria/aria-2.3.2-r4.ebuild +++ /dev/null @@ -1,88 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r4.ebuild,v 1.2 2013/01/17 20:24:41 jlec Exp $ - -EAPI=3 - -PYTHON_DEPEND="2" -PYTHON_USE_WITH="tk" - -inherit base eutils python versionator - -MY_P="${PN}$(get_version_component_range 1-2 ${PV})" - -DESCRIPTION="Automated NOE assignment and NMR structure calculation" -HOMEPAGE="http://aria.pasteur.fr/" -SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2_latest.tar.gz" - -SLOT="0" -LICENSE="cns" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -RDEPEND=" - sci-chemistry/clashlist - sci-chemistry/procheck - sci-libs/clashscore-db - dev-python/numpy - dev-python/matplotlib[tk] - >=sci-chemistry/cns-1.2.1-r7[aria,openmp] - dev-lang/tk - >=sci-chemistry/ccpn-2.2 - dev-tcltk/tix" -DEPEND="${RDEPEND}" - -RESTRICT="fetch" - -S="${WORKDIR}/${MY_P}" - -pkg_nofetch(){ - einfo "Go to http://aria.pasteur.fr/archives/aria2.3.2.tar.gz/view, download ${A}" - einfo "and place it in ${DISTDIR}" -} - -src_test(){ - export CCPNMR_TOP_DIR="${EPREFIX}"/$(python_get_sitedir) - export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python - $(PYTHON) check.py || die -} - -src_install(){ - insinto "$(python_get_sitedir)/${PN}" - doins -r src aria2.py || die "failed to install ${PN}" - insinto "$(python_get_sitedir)/${PN}"/cns - doins -r cns/{protocols,toppar,src/helplib} || die "failed to install cns part" - - if use examples; then - insinto /usr/share/${P}/ - doins -r examples || die - fi - - # ENV - cat >> "${T}"/20aria <<- EOF - ARIA2="${EPREFIX}/$(python_get_sitedir)/${PN}" - EOF - - doenvd "${T}"/20aria - - # Launch Wrapper - cat >> "${T}"/aria <<- EOF - #!/bin/sh - export CCPNMR_TOP_DIR="${EPREFIX}/$(python_get_sitedir)" - export PYTHONPATH="${EPREFIX}/$(python_get_sitedir)/ccpn/python" - exec "$(PYTHON)" -O "\${ARIA2}"/aria2.py \$@ - EOF - - dobin "${T}"/aria || die "failed to install wrapper" - dosym aria /usr/bin/aria2 - - dodoc README || die -} - -pkg_postinst() { - python_mod_optimize ${PN} -} - -pkg_postrm() { - python_mod_cleanup ${PN} -} diff --git a/sci-chemistry/aria/aria-2.3.2-r5.ebuild b/sci-chemistry/aria/aria-2.3.2-r5.ebuild deleted file mode 100644 index cc9f21735a85..000000000000 --- a/sci-chemistry/aria/aria-2.3.2-r5.ebuild +++ /dev/null @@ -1,89 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r5.ebuild,v 1.2 2013/05/29 16:14:45 jlec Exp $ - -EAPI=5 - -PYTHON_COMPAT=( python{2_6,2_7} ) -PYTHON_REQ_USE="tk" - -inherit base eutils python-single-r1 versionator - -MY_P="${PN}$(get_version_component_range 1-2 ${PV})" -DATE="03.25.2013" - -DESCRIPTION="Automated NOE assignment and NMR structure calculation" -HOMEPAGE="http://aria.pasteur.fr/" -SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2_${DATE}.tar.gz" - -SLOT="0" -LICENSE="cns" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND=" - ${PYTHON_DEPS} - dev-tcltk/tix - dev-lang/tk - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP},tk] - >=sci-chemistry/cns-1.2.1-r7[aria,openmp] - >=sci-chemistry/ccpn-2.2[${PYTHON_USEDEP}] - sci-chemistry/clashlist - sci-chemistry/procheck - sci-libs/clashscore-db" -DEPEND="${RDEPEND}" - -RESTRICT="fetch" - -S="${WORKDIR}/${MY_P}" - -pkg_nofetch(){ - einfo "Go to http://aria.pasteur.fr/archives/aria2.3.2.tar.gz/view, download ${A}" - einfo "and place it in ${DISTDIR}" -} - -pkg_setup() { - python-single-r1_pkg_setup -} - -src_test(){ - export CCPNMR_TOP_DIR=$(python_get_sitedir) - export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python - ${PYTHON} check.py || die -} - -src_install(){ - python_moduleinto ${PN} - python_domodule src aria2.py - python_moduleinto ${PN}/cns - python_domodule cns/{protocols,toppar,src/helplib} - - if use examples; then - insinto /usr/share/${P}/ - doins -r examples - fi - - # ENV - cat >> "${T}"/20aria <<- EOF - ARIA2="$(python_get_sitedir)/${PN}" - EOF - - doenvd "${T}"/20aria - - # Launch Wrapper - cat >> "${T}"/aria <<- EOF - #!/bin/sh - export CCPNMR_TOP_DIR="$(python_get_sitedir)" - export PYTHONPATH="$(python_get_sitedir)/ccpn/python" - exec "${PYTHON}" -O "\${ARIA2}"/aria2.py \$@ - EOF - - dobin "${T}"/aria - dosym aria /usr/bin/aria2 - - dodoc README - python_optimize "${D}/$(python_get_sitedir)" -} diff --git a/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild b/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild index 774b575adf8a..acad8dba43ca 100644 --- a/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild +++ b/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild @@ -1,13 +1,13 @@ -# Copyright 1999-2013 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild,v 1.1 2013/10/09 14:36:29 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2_p20130826.ebuild,v 1.2 2014/01/06 12:00:45 jlec Exp $ EAPI=5 PYTHON_COMPAT=( python{2_6,2_7} ) PYTHON_REQ_USE="tk" -inherit base eutils python-single-r1 versionator +inherit eutils python-single-r1 versionator MY_P="${PN}$(get_version_component_range 1-2 ${PV})" DATE="08.26.2013" |