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-rw-r--r--sci-physics/root/ChangeLog13
-rw-r--r--sci-physics/root/metadata.xml40
-rw-r--r--sci-physics/root/root-5.34.13-r1.ebuild425
3 files changed, 457 insertions, 21 deletions
diff --git a/sci-physics/root/ChangeLog b/sci-physics/root/ChangeLog
index eba237eb7813..553b118b3ee8 100644
--- a/sci-physics/root/ChangeLog
+++ b/sci-physics/root/ChangeLog
@@ -1,6 +1,17 @@
# ChangeLog for sci-physics/root
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.125 2013/12/05 17:34:12 bicatali Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.126 2013/12/10 16:41:01 jlec Exp $
+
+*root-5.34.13-r1 (10 Dec 2013)
+
+ 10 Dec 2013; Justin Lecher <jlec@gentoo.org> +root-5.34.13-r1.ebuild,
+ metadata.xml:
+ Merge changes from sci overlay
+
+ 10 Dec 2013; Andrew Savchenko <bircoph@gmail.com> -root-5.34.10-r2.ebuild,
+ root-5.34.13.ebuild, -files/root-5.28.00b-unuran.patch:
+ Add ROOTPrimer and Spectrum user guides.
+ Remove old versions.
*root-5.34.13 (05 Dec 2013)
diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml
index c4e415433298..bdcb7471a9dd 100644
--- a/sci-physics/root/metadata.xml
+++ b/sci-physics/root/metadata.xml
@@ -1,14 +1,14 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer>
- <email>bircoph@gmail.com</email>
- <name>Andrew Savchenko</name>
- <description>Maintainer. Assign bugs to him</description>
-</maintainer>
-<herd>sci-physics</herd>
-<herd>proxy-maintainers</herd>
-<longdescription lang="en">
+ <maintainer>
+ <email>bircoph@gmail.com</email>
+ <name>Andrew Savchenko</name>
+ <description>Maintainer. Assign bugs to him</description>
+ </maintainer>
+ <herd>sci-physics</herd>
+ <herd>proxy-maintainers</herd>
+ <longdescription lang="en">
ROOT Object Oriented Technologies is an object oriented data
analysis framework written in C++ by the CERN. Widely used in
high energy physics, but also in other data analysis applications. It
@@ -16,16 +16,16 @@
statistics, serialization, optimization, linear algebra, graphics,
GUI toolkit, and a complete visualization framework.
</longdescription>
-<use>
- <flag name="c++0x"> Build ROOT using the C++11 standard. Not supported, requires <pkg>sys-devel/gcc</pkg>&gt;=4.7.0</flag>
- <flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
- <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
- <flag name="htmldoc">Generate html documentation</flag>
- <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag>
- <flag name="metric">Default to A4 paper size and metric measurement</flag>
- <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag>
- <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag>
- <flag name="reflex">Build the reflection database for the C++ interpreter</flag>
- <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag>
-</use>
+ <use>
+ <flag name="c++0x"> Build ROOT using the C++11 standard. Not supported, requires <pkg>sys-devel/gcc</pkg>&gt;=4.7.0</flag>
+ <flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
+ <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
+ <flag name="htmldoc">Generate html documentation</flag>
+ <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag>
+ <flag name="metric">Default to A4 paper size and metric measurement</flag>
+ <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag>
+ <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag>
+ <flag name="reflex">Build the reflection database for the C++ interpreter</flag>
+ <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag>
+ </use>
</pkgmetadata>
diff --git a/sci-physics/root/root-5.34.13-r1.ebuild b/sci-physics/root/root-5.34.13-r1.ebuild
new file mode 100644
index 000000000000..12a1521a10f6
--- /dev/null
+++ b/sci-physics/root/root-5.34.13-r1.ebuild
@@ -0,0 +1,425 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.34.13-r1.ebuild,v 1.1 2013/12/10 16:41:01 jlec Exp $
+
+EAPI=5
+
+if [[ ${PV} == "9999" ]] ; then
+ _GIT=git-2
+ EGIT_REPO_URI="http://root.cern.ch/git/root.git"
+ SRC_URI=""
+ KEYWORDS=""
+else
+ SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+PYTHON_COMPAT=( python2_{6,7} )
+inherit elisp-common eutils fdo-mime fortran-2 ${_GIT} multilib python-single-r1 toolchain-funcs user versionator
+
+ROOFIT_DOC_PV=2.91-33
+TMVA_DOC_PV=4.03
+PATCH_PV=5.28.00b
+PATCH_PV2=5.32.00
+PATCH_PV3=5.34.05
+PATCH_PV4=5.34.13
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+SRC_URI="${SRC_URI}
+ !minimal? ( doc? (
+ math? (
+ ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
+ http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+ metric? ( ftp://root.cern.ch/root/doc/spectrum/Spectrum.pdf -> Spectrum-${PV}.pdf )
+ !metric? ( ftp://root.cern.ch/root/doc/spectrum/SpectrumLetter.pdf -> SpectrumLetter-${PV}.pdf )
+ )
+ metric? (
+ ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideA4.pdf -> ROOTUsersGuideA4-${PV}.pdf
+ ftp://root.cern.ch/root/doc/primer/ROOTPrimer.pdf -> ROOTPrimer-${PV}.pdf )
+ !metric? (
+ ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideLetter.pdf -> ROOTUsersGuideLetter-${PV}.pdf
+ ftp://root.cern.ch/root/doc/primer/ROOTPrimerLetter.pdf -> ROOTPrimerLetter-${PV}.pdf )
+ htmldoc? (
+ http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
+ http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
+ http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png )
+ ) )"
+
+SLOT="0"
+LICENSE="LGPL-2.1"
+IUSE="+X afs avahi c++0x doc emacs examples fits fftw graphviz htmldoc
+ kerberos ldap +math +metric minimal mpi mysql odbc +opengl openmp oracle postgres
+ prefix pythia6 pythia8 python qt4 +reflex ruby sqlite ssl xinetd xml xrootd"
+
+REQUIRED_USE="
+ !X? ( !opengl !qt4 )
+ htmldoc? ( doc )
+ mpi? ( math !openmp )
+ openmp? ( math !mpi )
+ python? ( ${PYTHON_REQUIRED_USE} )"
+
+CDEPEND="
+ app-arch/xz-utils
+ >=dev-lang/cfortran-4.4-r2
+ dev-libs/libpcre
+ media-fonts/dejavu
+ media-libs/freetype
+ media-libs/giflib
+ media-libs/libpng:0
+ media-libs/tiff:0
+ sys-libs/zlib
+ virtual/jpeg
+ virtual/shadow
+ X? (
+ media-libs/ftgl
+ media-libs/glew
+ x11-libs/libX11
+ x11-libs/libXext
+ x11-libs/libXpm
+ !minimal? (
+ || (
+ >=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
+ >=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
+ )
+ opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
+ qt4? (
+ dev-qt/qtgui:4
+ dev-qt/qtopengl:4
+ dev-qt/qt3support:4
+ dev-qt/qtsvg:4
+ dev-qt/qtwebkit:4
+ dev-qt/qtxmlpatterns:4
+ )
+ x11-libs/libXft
+ )
+ )
+ !minimal? (
+ afs? ( net-fs/openafs )
+ avahi? ( net-dns/avahi )
+ emacs? ( virtual/emacs )
+ fits? ( sci-libs/cfitsio )
+ fftw? ( sci-libs/fftw:3.0 )
+ graphviz? ( media-gfx/graphviz )
+ kerberos? ( virtual/krb5 )
+ ldap? ( net-nds/openldap )
+ math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
+ mysql? ( virtual/mysql )
+ odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+ oracle? ( dev-db/oracle-instantclient-basic )
+ postgres? ( dev-db/postgresql-base )
+ pythia6? ( sci-physics/pythia:6 )
+ pythia8? ( >=sci-physics/pythia-8.1.80:8 )
+ python? ( ${PYTHON_DEPS} )
+ ruby? (
+ dev-lang/ruby
+ dev-ruby/rubygems )
+ sqlite? ( dev-db/sqlite:3 )
+ ssl? ( dev-libs/openssl )
+ xml? ( dev-libs/libxml2 )
+ xrootd? ( >=net-libs/xrootd-3.2.0 )
+ )"
+
+DEPEND="${CDEPEND}
+ virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+ reflex? ( dev-cpp/gccxml )
+ xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
+
+S="${WORKDIR}/${PN}"
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ use python && python-single-r1_pkg_setup
+ echo
+ elog "There are extra options on packages not yet in Gentoo:"
+ elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
+ elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+ elog "You can use the env variable EXTRA_ECONF variable for this."
+ elog "For example, for SRP, you would set: "
+ elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
+ echo
+ enewgroup rootd
+ enewuser rootd -1 -1 /var/spool/rootd rootd
+ use minimal && return
+
+ if use math; then
+ if use openmp; then
+ if [[ $(tc-getCXX)$ == *g++* ]] && ! tc-has-openmp; then
+ ewarn "You are using a g++ without OpenMP capabilities"
+ die "Need an OpenMP capable compiler"
+ else
+ export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+ fi
+ elif use mpi; then
+ export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+ fi
+ fi
+ if use c++0x && [[ $(tc-getCXX) == *g++* ]] && \
+ ! version_is_at_least "4.7" "$(gcc-version)"; then
+ eerror "You are using a g++ without C++0x capabilities"
+ die "Need an C++0x capable compiler"
+ fi
+}
+
+src_prepare() {
+ epatch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-prop-flags.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV3}-nobyte-compile.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV4}-unuran.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV4}-pythia8.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV4}-desktop.patch
+
+ # make sure we use system libs and headers
+ rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+ rm -r graf2d/asimage/src/libAfterImage || die
+ rm -r graf3d/ftgl/{inc,src} || die
+ rm -r graf2d/freetype/src || die
+ rm -r graf3d/glew/{inc,src} || die
+ rm -r core/pcre/src || die
+ rm -r math/unuran/src/unuran-*.tar.gz || die
+ LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
+ rm -r core/lzma/src/*.tar.gz || die
+ rm graf3d/gl/{inc,src}/gl2ps.* || die
+ sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
+
+ # In Gentoo, libPythia6 is called libpythia6
+ # libungif is called libgif,
+ # iodbc is in /usr/include/iodbc
+ # pg_config.h is checked instead of libpq-fe.h
+ sed -i \
+ -e 's:libPythia6:libpythia6:g' \
+ -e 's:ungif:gif:g' \
+ -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+ -e 's:libpq-fe.h:pg_config.h:' \
+ configure || die "adjusting configure for Gentoo failed"
+
+ # prefixify the configure script
+ sed -i \
+ -e 's:/usr:${EPREFIX}/usr:g' \
+ configure || die "prefixify configure failed"
+
+ # QTDIR only used for qt3 in gentoo, and configure looks for it.
+ unset QTDIR
+
+ # Make html docs self-consistent for offline work (based on Fedora spec)
+ if use htmldoc && ! use minimal; then
+ epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
+ # make images local
+ sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
+ -i etc/html/ROOT.css || die "htmldoc sed failed"
+ sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
+ -i etc/html/ROOT.css || die "htmldoc sed failed"
+ sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
+ -i etc/html/header.html || die "htmldoc sed failed"
+
+ cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
+ die "htmldoc preparation failed"
+ fi
+}
+
+src_configure() {
+ # the configure script is not the standard autotools
+ local mycommonconf="
+ --prefix="${EPREFIX}"/usr \
+ --etcdir="${EPREFIX}"/etc/root \
+ --libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
+ --docdir="${EPREFIX}"/usr/share/doc/${PF} \
+ --tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
+ --testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
+ --with-cc=$(tc-getCC) \
+ --with-cxx=$(tc-getCXX) \
+ --with-f77=$(tc-getFC) \
+ --with-ld=$(tc-getCXX) \
+ --nohowto
+ "
+ if use minimal; then
+ ./configure \
+ ${mycommonconf} \
+ $(usex X --gminimal --minimal) \
+ || die "configure failed"
+ return
+ fi
+ # cling is disabled because in requires live llvm and clang
+ ./configure \
+ ${mycommonconf} \
+ --with-afs-shared=yes \
+ --with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
+ --disable-builtin-afterimage \
+ --disable-builtin-ftgl \
+ --disable-builtin-freetype \
+ --disable-builtin-glew \
+ --disable-builtin-pcre \
+ --disable-builtin-zlib \
+ --disable-builtin-lzma \
+ --disable-cling \
+ --enable-astiff \
+ --enable-explicitlink \
+ --enable-gdml \
+ --enable-memstat \
+ --enable-shadowpw \
+ --enable-shared \
+ --enable-soversion \
+ --enable-table \
+ --fail-on-missing \
+ $(use_enable X x11) \
+ $(use_enable X asimage) \
+ $(use_enable X xft) \
+ $(use_enable afs) \
+ $(use_enable avahi bonjour) \
+ $(use_enable c++0x cxx11) \
+ $(use_enable fits fitsio) \
+ $(use_enable fftw fftw3) \
+ $(use_enable graphviz gviz) \
+ $(use_enable kerberos krb5) \
+ $(use_enable ldap) \
+ $(use_enable math gsl-shared) \
+ $(use_enable math genvector) \
+ $(use_enable math mathmore) \
+ $(use_enable math minuit2) \
+ $(use_enable math roofit) \
+ $(use_enable math tmva) \
+ $(use_enable math unuran) \
+ $(use_enable mysql) \
+ $(use_enable odbc) \
+ $(use_enable opengl) \
+ $(use_enable oracle) \
+ $(use_enable postgres pgsql) \
+ $(usex postgres "--with-pgsql-incdir=$(pg_config --includedir)" "") \
+ $(use_enable prefix rpath) \
+ $(use_enable pythia6) \
+ $(use_enable pythia8) \
+ $(use_enable python) \
+ $(use_enable qt4 qt) \
+ $(use_enable qt4 qtgsi) \
+ $(use_enable reflex cintex) \
+ $(use_enable reflex) \
+ $(use_enable ruby) \
+ $(use_enable sqlite) \
+ $(use_enable ssl) \
+ $(use_enable xml) \
+ $(use_enable xrootd) \
+ ${EXTRA_ECONF} \
+ || die "configure failed"
+}
+
+src_compile() {
+ emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}" ROOTSYS="${S}" LD_LIBRARY_PATH="${S}/lib"
+ if use emacs && ! use minimal; then
+ elisp-compile build/misc/*.el || die "elisp-compile failed"
+ fi
+}
+
+doc_install() {
+ cd "${S}"
+ if use doc && ! use minimal; then
+ einfo "Installing user's guides"
+ if use metric; then
+ dodoc "${DISTDIR}"/ROOTUsersGuideA4-${PV}.pdf
+ dodoc "${DISTDIR}"/ROOTPrimer-${PV}.pdf
+ use math && dodoc "${DISTDIR}"/Spectrum-${PV}.pdf
+ else
+ dodoc "${DISTDIR}"/ROOTUsersGuideLetter-${PV}.pdf
+ dodoc "${DISTDIR}"/ROOTPrimerLetter-${PV}.pdf
+ use math && dodoc "${DISTDIR}"/SpectrumLetter-${PV}.pdf
+ fi
+ use math && dodoc \
+ "${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
+ "${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+ fi
+
+ if use examples && ! use minimal; then
+ # these should really be taken care of by the root make install
+ insinto /usr/share/doc/${PF}/examples/tutorials/tmva
+ doins -r tmva/test
+ else
+ rm -r "${ED}"/usr/share/doc/${PF}/examples || die
+ fi
+}
+
+daemon_install() {
+ cd "${S}"
+ local daemons="rootd proofd"
+ dodir /var/spool/rootd
+ fowners rootd:rootd /var/spool/rootd
+ dodir /var/spool/rootd/{pub,tmp}
+ fperms 1777 /var/spool/rootd/{pub,tmp}
+
+ for i in ${daemons}; do
+ newinitd "${FILESDIR}"/${i}.initd ${i}
+ newconfd "${FILESDIR}"/${i}.confd ${i}
+ done
+ if use xinetd; then
+ insinto /etc/xinetd
+ doins etc/daemons/{rootd,proofd}.xinetd
+ fi
+}
+
+desktop_install() {
+ cd "${S}"
+ echo "Icon=root-system-bin" >> etc/root.desktop
+ domenu etc/root.desktop
+ doicon build/package/debian/root-system-bin.png
+
+ insinto /usr/share/icons/hicolor/48x48/mimetypes
+ doins build/package/debian/application-x-root.png
+
+ insinto /usr/share/icons/hicolor/48x48/apps
+ doicon build/package/debian/root-system-bin.xpm
+}
+
+src_install() {
+ emake DESTDIR="${D}" install
+
+ echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
+ if ! use minimal; then
+ use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
+ if use python; then
+ echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+ python_optimize "${D}/usr/$(get_libdir)/root"
+ fi
+ use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+ fi
+ doenvd 99root
+
+ # The build system installs Emacs support unconditionally and in the wrong
+ # directory. Remove it and call elisp-install in case of USE=emacs.
+ rm -r "${ED}"/usr/share/emacs
+ if use emacs && ! use minimal; then
+ elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
+ fi
+
+ doc_install
+ daemon_install
+ desktop_install
+
+ # Cleanup of files either already distributed or unused on Gentoo
+ rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
+ rm "${ED}"usr/share/root/fonts/LICENSE || die
+ pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
+ rm posix/mktypes dll_stl/setup \
+ G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
+ rm "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
+ rm "${ED}"/etc/root/proof/*.sample || die
+ rm -r "${ED}"/etc/root/daemons || die
+ popd > /dev/null
+ # these should be in PATH
+ mv "${ED}"etc/root/proof/utils/pq2/pq2* \
+ "${ED}"usr/bin/ || die
+}
+
+pkg_postinst() {
+ fdo-mime_desktop_database_update
+}
+
+pkg_postrm() {
+ fdo-mime_desktop_database_update
+}