2 files changed, 42 insertions, 1 deletions
diff --git a/sci-biology/mothur/ChangeLog b/sci-biology/mothur/ChangeLog
index e7eb46ee2ec5..aa5507440a3a 100644
--- a/sci-biology/mothur/ChangeLog
+++ b/sci-biology/mothur/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/mothur
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/ChangeLog,v 1.6 2010/08/27 09:28:47 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/ChangeLog,v 1.7 2010/09/26 02:30:24 weaver Exp $
+
+*mothur-1.13.0 (26 Sep 2010)
+
+  26 Sep 2010; Andrey Kislyuk <weaver@gentoo.org> +mothur-1.13.0.ebuild:
+  Version bump
 
 *mothur-1.7.2-r1 (27 Aug 2010)
 
diff --git a/sci-biology/mothur/mothur-1.13.0.ebuild b/sci-biology/mothur/mothur-1.13.0.ebuild
new file mode 100644
index 000000000000..392961eb18b6
--- /dev/null
+++ b/sci-biology/mothur/mothur-1.13.0.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/mothur-1.13.0.ebuild,v 1.1 2010/09/26 02:30:24 weaver Exp $
+
+EAPI="2"
+
+inherit toolchain-funcs flag-o-matic
+
+DESCRIPTION="A suite of algorithms for ecological bioinformatics"
+HOMEPAGE="http://schloss.micro.umass.edu/wiki/Main_Page"
+SRC_URI="mirror://gentoo/${P}.zip"
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE="mpi +readline"
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="app-arch/unzip
+	mpi? ( virtual/mpi )"
+RDEPEND=""
+
+S="${WORKDIR}/Mothur.source"
+
+src_prepare() {
+	filter-ldflags -Wl,--as-needed
+	sed -i -e 's/CC_OPTIONS =/CC_OPTIONS = ${CXXFLAGS} /' \
+		-e '/USEMPI ?=/ d' -e '/USEREADLINE ?=/ d' \
+		-e 's|CC = g++|CC = '$(tc-getCXX)'|' "${S}/makefile" || die
+
+	use mpi && sed -i '1 a USEMPI = yes' "${S}/makefile"
+	use readline && sed -i '1 a USEREADLINE = yes' "${S}/makefile"
+}
+
+src_install() {
+	dobin mothur || die
+}