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* Remove perlocal.pod file to avoid file collisions (see bug #240358).Markus Dittrich2008-10-091-2/+2
| | | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Remove perlocal.pod file to avoid file collisions (see bug #240358).Markus Dittrich2008-10-092-3/+10
| | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Fixed ignored LDFLAGS issues and bogus detection of GD support. Also enabled ↵Markus Dittrich2008-10-061-2/+4
| | | | | | | the tests that come with the package. (Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Fixed ignored LDFLAGS issues and bogus detection of GD support. Also enabled ↵Markus Dittrich2008-10-064-4/+62
| | | | | | the tests that come with the package. (Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686)
* add ~amd64 kw based on Chad's testing. bug #239162Jeremy Olexa2008-09-301-2/+2
| | | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-gentoo x86_64) (Unsigned Manifest commit)
* add ~amd64 kw based on Chad's testing. bug #239162Jeremy Olexa2008-09-302-3/+6
| | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-gentoo x86_64)
* add ~amd64 kw based on Chad's testing. bug #239159Jeremy Olexa2008-09-301-2/+2
| | | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-gentoo x86_64) (Unsigned Manifest commit)
* add ~amd64 kw based on Chad's testing. bug #239159Jeremy Olexa2008-09-302-5/+8
| | | | (Portage version: 2.2_rc11/cvs/Linux 2.6.26-gentoo x86_64)
* whitespaceMichael Sterrett2008-09-231-1/+1
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* whitespaceMichael Sterrett2008-09-231-2/+1
| | | | (Portage version: 2.1.4.4)
* Added patch to fix insecure tempfile handling (see bug #235804). Removed ↵Markus Dittrich2008-09-231-4/+3
| | | | | | | ebuilds for vulnerable versions. (Portage version: 2.2_rc9/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Added patch to fix insecure tempfile handling (see bug #235804). Removed ↵Markus Dittrich2008-09-234-36/+211
| | | | | | ebuilds for vulnerable versions. (Portage version: 2.2_rc9/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Pruned old versions, fixing bug #237441.Olivier Fisette2008-09-131-5/+1
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* Pruned old versions, fixing bug #237441.Olivier Fisette2008-09-133-67/+5
| | | | (Portage version: 2.1.4.4)
* whitespaceMichael Sterrett2008-09-121-1/+1
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* whitespaceMichael Sterrett2008-09-121-2/+2
| | | | (Portage version: 2.1.4.4)
* Version bump.Markus Dittrich2008-09-121-1/+3
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Version bump.Markus Dittrich2008-09-122-1/+102
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Added patch to fix gcc-4.3 header issue (bug #237077). Relaxed dependency on ↵Markus Dittrich2008-09-091-2/+3
| | | | | | | full qt:4 to qt-gui:4 only which should be sufficient. Finally, keyworded the 2.0.9 ebuild amd64 since it works fine. (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Added patch to fix gcc-4.3 header issue (bug #237077). Relaxed dependency on ↵Markus Dittrich2008-09-093-4/+25
| | | | | | full qt:4 to qt-gui:4 only which should be sufficient. Finally, keyworded the 2.0.9 ebuild amd64 since it works fine. (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Keyworded amd64 since it works just fine.Markus Dittrich2008-09-091-2/+2
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Keyworded amd64 since it works just fine.Markus Dittrich2008-09-092-3/+6
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* quotes tweakAndrey Kislyuk2008-09-071-1/+1
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686) (Unsigned Manifest commit)
* quotes tweakAndrey Kislyuk2008-09-071-2/+2
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686)
* gcc 4.3 tweakAndrey Kislyuk2008-09-071-1/+1
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686) (Unsigned Manifest commit)
* gcc 4.3 tweakAndrey Kislyuk2008-09-071-2/+3
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686)
* Import from science overlayAndrey Kislyuk2008-09-071-2/+2
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686) (Unsigned Manifest commit)
* Import from science overlayAndrey Kislyuk2008-09-074-0/+68
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686)
* Update package ownerAndrey Kislyuk2008-09-071-1/+1
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686) (Unsigned Manifest commit)
* Update package ownerAndrey Kislyuk2008-09-071-1/+5
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* Import from science overlayAndrey Kislyuk2008-09-071-2/+2
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686) (Unsigned Manifest commit)
* Import from science overlayAndrey Kislyuk2008-09-074-0/+58
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-tuxonice i686)
* Version bump and removed old ebuilds.Markus Dittrich2008-09-071-5/+3
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Version bump and removed old ebuilds.Markus Dittrich2008-09-073-41/+18
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Fix outdated HOMEPAGE and keyword amd64.Markus Dittrich2008-09-071-2/+2
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Fix outdated HOMEPAGE and keyword amd64.Markus Dittrich2008-09-072-6/+9
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Commit Manifest.Markus Dittrich2008-09-071-2/+2
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Fixed bad HOMEPAGE and formatting in ebuild.Markus Dittrich2008-09-072-4/+7
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Version bump and removed old ebuilds (fixes bug #232323). According to the ↵Markus Dittrich2008-09-061-5/+3
| | | | | | | website and docs, t-coffee is now released under the GPL-2, hence changed the license info and uploaded the tarball to our mirrors. (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Version bump and removed old ebuilds (fixes bug #232323). According to the ↵Markus Dittrich2008-09-063-87/+29
| | | | | | website and docs, t-coffee is now released under the GPL-2, hence changed the license info and uploaded the tarball to our mirrors. (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* Version bump and removed old ebuilds (fixes bug #235943).Markus Dittrich2008-08-291-15/+4
| | | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686) (Unsigned Manifest commit)
* Version bump and removed old ebuilds (fixes bug #235943).Markus Dittrich2008-08-294-54/+96
| | | | (Portage version: 2.2_rc8/cvs/Linux 2.6.26-SENTINEL-2 i686)
* New upstream version.Olivier Fisette2008-08-281-1/+3
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* New upstream version.Olivier Fisette2008-08-282-1/+52
| | | | (Portage version: 2.1.4.4)
* New upstream version.Olivier Fisette2008-08-281-1/+3
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* New upstream version.Olivier Fisette2008-08-282-1/+23
| | | | (Portage version: 2.1.4.4)
* Fix broken manifest.Olivier Fisette2008-08-281-1/+1
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* Fixing broken Manifest.Olivier Fisette2008-08-281-1/+1
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)
* Fixing broken Manifest.Olivier Fisette2008-08-281-1/+4
| | | | (Portage version: 2.1.4.4)
* Depend on ClustalW 1.x as ClustalX 2.x will soon enter Portage.Olivier Fisette2008-08-271-2/+2
| | | | | (Portage version: 2.1.4.4) (Unsigned Manifest commit)