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# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild,v 1.6 2012/08/12 17:41:22 jlec Exp $
EAPI=4
PYTHON_DEPEND="2:2.7"
SUPPORT_PYTHON_ABIS="1"
RESTRICT_PYTHON_ABIS="2.4 2.5 2.6 3.* *-jython 2.7-pypy-*"
PYTHON_USE_WITH="tk"
PYTHON_MODNAME="${PN} chempy pmg_tk pmg_wx"
inherit distutils eutils fdo-mime prefix versionator
DESCRIPTION="A Python-extensible molecular graphics system"
HOMEPAGE="http://pymol.sourceforge.net/"
SRC_URI="
mirror://sourceforge/project/${PN}/${PN}/${PV}/${PN}-v${PV}.tar.bz2
http://dev.gentoo.org/~jlec/distfiles/${PN}-icons.tar.xz"
LICENSE="PSF-2.2"
SLOT="0"
KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
IUSE="apbs numpy vmd web"
DEPEND="
dev-python/numpy
dev-python/pmw
media-libs/freetype:2
media-libs/glew
media-libs/libpng
media-video/mpeg-tools
sys-libs/zlib
media-libs/freeglut
apbs? (
dev-libs/maloc
sci-chemistry/apbs
sci-chemistry/pdb2pqr
sci-chemistry/pymol-apbs-plugin
)
web? ( !dev-python/webpy )"
RDEPEND="${DEPEND}"
S="${WORKDIR}"/${PN}
src_prepare() {
epatch \
"${FILESDIR}"/${P}-setup.py.patch \
"${FILESDIR}"/${P}-data-path.patch \
"${FILESDIR}"/${P}-flags.patch
use web || epatch "${FILESDIR}"/${P}-web.patch
epatch "${FILESDIR}"/${P}-prefix.patch && \
eprefixify setup.py
use vmd && epatch "${FILESDIR}"/${P}-vmd.patch
if use numpy; then
sed \
-e '/PYMOL_NUMPY/s:^#::g' \
-i setup.py || die
fi
rm ./modules/pmg_tk/startup/apbs_tools.py || die
echo "site_packages = \'$(python_get_sitedir -f)\'" > setup3.py || die
# python 3.* fix
# sed '452,465d' -i setup.py
distutils_src_prepare
}
src_configure() {
:
}
src_install() {
distutils_src_install
# These environment variables should not go in the wrapper script, or else
# it will be impossible to use the PyMOL libraries from Python.
cat >> "${T}"/20pymol <<- EOF
PYMOL_PATH="${EPREFIX}/$(python_get_sitedir -f)/${PN}"
PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
EOF
doenvd "${T}"/20pymol
cat >> "${T}"/pymol <<- EOF
#!/bin/sh
$(PYTHON -f) -O \${PYMOL_PATH}/__init__.py -q \$*
EOF
dobin "${T}"/pymol
insinto /usr/share/pymol
doins -r test data scripts
insinto /usr/share/pymol/examples
doins -r examples
dodoc DEVELOPERS README
doicon "${WORKDIR}"/${PN}.{xpm,png}
make_desktop_entry pymol PyMol ${PN} "Graphics;Education;Science;Chemistry"
}
pkg_postinst() {
elog "\t USE=shaders was removed,"
elog "please use pymol config settings"
elog "\t set use_shaders, 1"
distutils_pkg_postinst
fdo-mime_desktop_database_update
fdo-mime_mime_database_update
}
pkg_postrm() {
fdo-mime_desktop_database_update
fdo-mime_mime_database_update
}
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