diff options
| -rw-r--r-- | dev-python/pynwb/Manifest | 1 | ||||
| -rw-r--r-- | dev-python/pynwb/pynwb-2.8.1.ebuild | 54 |
2 files changed, 55 insertions, 0 deletions
diff --git a/dev-python/pynwb/Manifest b/dev-python/pynwb/Manifest index 0dffbb9ab..af90c66d6 100644 --- a/dev-python/pynwb/Manifest +++ b/dev-python/pynwb/Manifest @@ -1,2 +1,3 @@ DIST pynwb-2.5.0.tar.gz 620770 BLAKE2B 470f5127560bf79f112061e9e8af208051d76833e449a66b03e31bb0828ffbfd6aa0b9efc136ecc0b7efba758334c3f15525a41ec4540c6f55d02f8afbd55ab2 SHA512 cad84e3ac6c3c67c3c28e3c3ec44402bfc94c4cf988fbe64ddfa461a67115398b24bb9bcac1bd00933e1b63d73048d9b20ec6cd736a51d9f2c7bf4d294edb261 DIST pynwb-2.6.0.tar.gz 625188 BLAKE2B ac179af7e3c9de6ec4fb841dfd6279a1c3ba191b9d786553af02397a49c511f4a257a0e62f3b57a217ebb08588ad8ca64219fd435b3ec25776775d05e6a9ab9b SHA512 5c830cb37e8c6fe0643bd5bfee947565ddb1d0eff16dadadd3ebec7ec14a6e1ebcf34c3909ad05c3eedd8dd5f9e3669348216d695123f2013de0e969a403ec1c +DIST pynwb-2.8.1.tar.gz 34769136 BLAKE2B b7fb44380b35edb07da5030c559ce5b7ffb73f7ffa4a00ce838544a124b644eb293232bcd6b9a3d999256eaa102e4ca68aff5302e3cdff342ba42a1fc9ebc403 SHA512 ba2c74b889b725f5abf20b337c9de89357900d5316cd2de0bff5548a1bf3fe80078c05e2652b8cfd76aedcab58457e86cb15e2decd9eb22729b148b3a7b28637 diff --git a/dev-python/pynwb/pynwb-2.8.1.ebuild b/dev-python/pynwb/pynwb-2.8.1.ebuild new file mode 100644 index 000000000..5be67428b --- /dev/null +++ b/dev-python/pynwb/pynwb-2.8.1.ebuild @@ -0,0 +1,54 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +#DISTUTILS_USE_PEP517=setuptools +DISTUTILS_USE_PEP517=hatchling +PYTHON_COMPAT=( python3_{10..12} ) +inherit distutils-r1 pypi + +DESCRIPTION="A Python API for working with Neurodata stored in the NWB Format " +HOMEPAGE="https://github.com/NeurodataWithoutBorders/pynwb" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~x86" +# Segfault error on testing +RESTRICT="test" + +RDEPEND=" + >=dev-python/hdmf-3.14.3[${PYTHON_USEDEP}] + >=sci-libs/hdf5-1.12.2 + dev-python/h5py[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/python-dateutil[${PYTHON_USEDEP}] + dev-python/requests[${PYTHON_USEDEP}] + " + +EPYTEST_DESELECT=( + # Reported upsream: + # https://github.com/NeurodataWithoutBorders/pynwb/issues/1580 + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_bad_ns + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_core + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_extension + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_extension_pass_ns + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_hdmf_common + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_ignore + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_invalid + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_list_namespaces_core + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_list_namespaces_extension + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_no_cache + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_no_cache_bad_ns + # Reported upstream: + # https://github.com/NeurodataWithoutBorders/pynwb/issues/1800 + tests/unit/test_file.py::TestNoCacheSpec::test_simple + # Not sandboxed, reported upstream: + # https://github.com/NeurodataWithoutBorders/pynwb/issues/1800 + tests/read_dandi/test_read_dandi.py::TestReadNWBDandisets::test_read_first_nwb_asset + tests/unit/test_base.py::TestTimeSeries::test_repr_html +) + +distutils_enable_tests pytest |