sci-astronomy/esomidas: version bump

Package-Manager: Portage-2.3.6, Repoman-2.3.2

20 files changed, 31 insertions, 667 deletions

diff --git a/sci-astronomy/esomidas/Manifest b/sci-astronomy/esomidas/Manifest
index 6d71d144816a..660210dbedc9 100644
--- a/sci-astronomy/esomidas/Manifest
+++ b/sci-astronomy/esomidas/Manifest
@@ -1 +1 @@
-DIST esomidas-15.09.tar.gz 60770911 SHA256 74f1ea0e4cce958c67f5f2db061a073c9fb05190d9c1f1612e77888282a194be SHA512 774029ac2e79a563a1c94c5de4f7cb74f18695e8f83f3d939208bdde656d1e83783e2ae276ae841a3b5c7eaf81946111c3c02ace1b74899e98f1b1dd15ba320b WHIRLPOOL a7135f9f47fa53dbe60288afbcdf462f3f7327736ae473c43766185b1a57836eb2cf120705d9db495d62a5a26efca533afd6cc5719a7c4c4d224fe301234584e
+DIST esomidas-17.02.tar.gz 60771186 SHA256 27254dca5cd07562408d8fefb9c907a42c733c95c3010cc1a28cb9919ab48c68 SHA512 7e4c6a8d8349a9e1647e48571bf5e04abd239c24020ffdf5984a0598b837061ca7765e31209869a4e302e1f85c3494852a22541149c10cc916376048e40b6324 WHIRLPOOL 80334f8c2afb34e6d203c49386a9e4b7449ba16abebf75885a29bcdd03012b81cafba675beebc549a6c07f4787b9efd678c7a18ffac56046e8424648d9629104
diff --git a/sci-astronomy/esomidas/esomidas-15.09.ebuild b/sci-astronomy/esomidas/esomidas-17.02.ebuild
index 4b712e767e89..acaa2eb1c23a 100644
--- a/sci-astronomy/esomidas/esomidas-15.09.ebuild
+++ b/sci-astronomy/esomidas/esomidas-17.02.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
@@ -6,11 +6,11 @@ EAPI=6
 inherit eutils fortran-2 toolchain-funcs flag-o-matic
 
 # MIDVERS is actually used by MIDAS configuration scripts
-export MIDVERS="15SEPpl1.0"
+export MIDVERS="17FEBpl1.2"
 
 DESCRIPTION="European Southern Observatory Munich Image Data Analysis System"
 HOMEPAGE="http://www.eso.org/projects/esomidas/"
-SRC_URI="ftp://ftp.eso.org/pub/midaspub/15SEP/sources/${MIDVERS}.tar.gz -> ${P}.tar.gz"
+SRC_URI="ftp://ftp.eso.org/pub/midaspub/17FEB/sources/${MIDVERS}.tar.gz -> ${P}.tar.gz"
 
 LICENSE="GPL-2"
 SLOT="0/8"
@@ -28,23 +28,8 @@ DEPEND="${RDEPEND}"
 S="${WORKDIR}/${MIDVERS}"
 
 PATCHES=(
-	"${FILESDIR}/${PN}-gentoo-setup.patch"
-	"${FILESDIR}/${PN}-cleanmidas.patch"
-	"${FILESDIR}/${PN}-fitswdb.patch"
-	"${FILESDIR}/${PN}-fitswdm_c.patch"
-	"${FILESDIR}/${PN}-log-stdout.patch"
-	"${FILESDIR}/${PN}-madrid.patch"
-	"${FILESDIR}/${PN}-manpages.patch"
-	"${FILESDIR}/${PN}-mdb_put.patch"
-	"${FILESDIR}/${PN}-no-sp_pty.patch"
-	"${FILESDIR}/${PN}-no-strip.patch"
-	"${FILESDIR}/${PN}-nonlinux.patch"
-	"${FILESDIR}/${PN}-rarthm_for.patch"
-	"${FILESDIR}/${PN}-selechar_c.patch"
-	"${FILESDIR}/${PN}-system-readline.patch"
-	"${FILESDIR}/${PN}-x11-include-path.patch"
-	"${FILESDIR}/${PN}-propagate-flags.patch"
-	"${FILESDIR}/${PN}-syskeys.patch"
+	"${FILESDIR}/${P}-output_to_stdout.patch"
+	"${FILESDIR}/${P}-gentoo-setup.patch"
 )
 
 src_prepare() {
diff --git a/sci-astronomy/esomidas/files/esomidas-17.02-gentoo-setup.patch b/sci-astronomy/esomidas/files/esomidas-17.02-gentoo-setup.patch
new file mode 100644
index 000000000000..f6fb0515ee74
--- /dev/null
+++ b/sci-astronomy/esomidas/files/esomidas-17.02-gentoo-setup.patch
@@ -0,0 +1,12 @@
+--- a/install/unix/preinstall	2017-06-29 23:49:01.295996178 +0000
++++ b/install/unix/preinstall	2017-06-29 23:50:21.835445329 +0000
+@@ -124,6 +124,9 @@
+ if [ -d "Debian" -a -f "/etc/debian_version" ];  then
+     system="Debian"
+ 
++elif [ -d "Gentoo" -a -f "/etc/gentoo-release" ];  then
++    system="Gentoo"
++
+ elif [ "$uname" = "Darwin" ]; then
+     system="Darwin"
+ 
diff --git a/sci-astronomy/esomidas/files/esomidas-log-stdout.patch b/sci-astronomy/esomidas/files/esomidas-17.02-output_to_stdout.patch
index b7cc37643209..bd24c3801d99 100644
--- a/sci-astronomy/esomidas/files/esomidas-log-stdout.patch
+++ b/sci-astronomy/esomidas/files/esomidas-17.02-output_to_stdout.patch
@@ -1,9 +1,17 @@
-Author: Ole Streicher <debian@liska.ath.cx>
-Description: Run compilation in foreground and write log to stdout
- instead of a file.
+From: Ole Streicher <debian@liska.ath.cx>
+Date: Wed, 1 Mar 2017 09:31:31 +0100
+Subject: Run compilation in foreground and write log to stdout instead of a
+ file.
+
+---
+ install/unix/install3 | 14 ++------------
+ 1 file changed, 2 insertions(+), 12 deletions(-)
+
+diff --git a/install/unix/install3 b/install/unix/install3
+index ef2a415..1cc0b4e 100755
 --- a/install/unix/install3
 +++ b/install/unix/install3
-@@ -112,8 +112,6 @@
+@@ -112,8 +112,6 @@ fi
  
  echo ""
  echo "WARNING: MIDAS installation will delete all dependent files."
@@ -12,7 +20,7 @@ Description: Run compilation in foreground and write log to stdout
  echo ""
  echo "Do you want to continue [yn]? (y): " $SV_NONL
  unset answ
-@@ -138,17 +136,9 @@
+@@ -138,17 +136,9 @@ fi
  
  # do we have the 'time' command?
  if [ $CMND_YES = 2 ] ; then
@@ -32,36 +40,3 @@ Description: Run compilation in foreground and write log to stdout
 -  echo ""
 -fi
  exit 0
---- a/lib/makefile
-+++ b/lib/makefile
-@@ -18,7 +18,7 @@
- 
- include ../local/default.mk
- 
--DEV_NULL = >/dev/null 2>&1
-+DEV_NULL =
- 
- LIBMIDAS = $(LIBDIR)/libmidas.a 
- LIBGMIDAS = $(LIBDIR)/libgmidas.a 
---- a/system/ftoc/makefile
-+++ b/system/ftoc/makefile
-@@ -12,7 +12,7 @@
- include ../../local/default.mk
- 
- DEV_NULL= >/dev/null 2>&1
--# DEV_NULL=
-+DEV_NULL=
- 
- M = ../exec
- 
---- a/system/machine/makefile
-+++ b/system/machine/makefile
-@@ -16,7 +16,7 @@
- 
- include ../../local/default.mk
- 
--DEV_NULL= >/dev/null 2>&1
-+DEV_NULL=
- 
- M = ../exec
- 
diff --git a/sci-astronomy/esomidas/files/esomidas-cleanmidas.patch b/sci-astronomy/esomidas/files/esomidas-cleanmidas.patch
deleted file mode 100644
index 53f234749844..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-cleanmidas.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Use predefined MIDVERS and MIDASHOME in cleanmidas
- Cleanmidas assumes the the parent directory of "15FEBpl1.1" is "midas",
- which is not required in the installation guide.
---- a/system/unix/cleanmidas
-+++ b/system/unix/cleanmidas
-@@ -54,11 +54,13 @@
-         [ $answer = y ]
- }
- 
--
- MID_HERE=`pwd`
--MIDVERS=`echo $MID_HERE | sed 's/^.*midas\/\([^\/]*\).*$/\1/'`
--MIDASHOME=`echo $MID_HERE | sed 's/\/'$MIDVERS'.*$//'`
--
-+if [ -z "$MIDVERS" ] ; then
-+  MIDVERS=`echo $MID_HERE | sed 's/^.*midas\/\([^\/]*\).*$/\1/'`
-+fi
-+if [ -z "$MIDASHOME" ] ; then
-+  MIDASHOME=`echo $MID_HERE | sed 's/\/'$MIDVERS'.*$//'`
-+fi
- MID_HOME=$MIDASHOME/$MIDVERS
- 
- export MIDASHOME MIDVERS
diff --git a/sci-astronomy/esomidas/files/esomidas-fitswdb.patch b/sci-astronomy/esomidas/files/esomidas-fitswdb.patch
deleted file mode 100644
index b0459a1317ec..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-fitswdb.patch
+++ /dev/null
@@ -1,46 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Another off-by-one
- Fixes:
- .
-  ERROR: AddressSanitizer: stack-buffer-overflow on address 0x7fff9e7713b1 at pc 0x7f4135c48c7c bp 0x7fff9e770e20 sp 0x7fff9e770e18
-WRITE of size 1 at 0x7fff9e7713b1 thread T0
-    #0 0x7f4135c48c7b in fitswdb prim/dio/libsrc/fitswdb.c:243
-    #1 0x7f4135c4a61c in fitswhd prim/dio/libsrc/fitswhd.c:450
-    #2 0x7f4135caab6e in SCFSAV libsrc/st/scfa.c:157
-    #3 0x7f4135caff75 in SCFCLO libsrc/st/scfb.c:483
-    #4 0x7f4135cba83e in SCSEPI libsrc/st/scs.c:353
-    #5 0x7f4135cc6cd8 in stsepi_ libsrc/ftoc/sts.c:67
-    #6 0x409fb7 in statis prim/display/src/statis.f:1034
-    #7 0x40549c in main prim/display/src/statis.f:1056
-    #8 0x7f4134de2b44 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x21b44)
-    #9 0x405a92 (prim/exec/statis.exe+0x405a92)
-
-Address 0x7fff9e7713b1 is located in stack of thread T0 at offset 1265 in frame
-    #0 0x7f4135c45c7f in fitswdb prim/dio/libsrc/fitswdb.c:88
-
-  This frame has 21 object(s):
-    [32, 36) 'nv'
-   [...]
-    [1056, 1137) 'com'
-    [1184, 1265) 'cval' <== Memory access at offset 1265 overflows this variable
-    [1312, 1393) 'line'
-    [1440, 1521) 'help'
-
---- a/prim/dio/libsrc/fitswdb.c
-+++ b/prim/dio/libsrc/fitswdb.c
-@@ -240,12 +240,12 @@
- 		  if (dtk->ctl==NCTL || dtk->ctl==SCTL) {
- 		     nc = (MXLB<nbp) ? MXLB : nbp;
- 		     SCDRDC(mfd,md->name,1,ns,nc,&nv,cval,unit,&null);
--		     cval[nv] = '\0';
--		     for (nn=0; nn<nv; nn++)
-+		     cval[nv-1] = '\0';
-+		     for (nn=0; nn<nv-1; nn++)
- 		       if (cval[nn]<' ' || '~'<cval[nn])
- 			 cval[nn] = ' ';
- 		     if(dtk->ctl==SCTL) {
--			ival = nv-1;
-+			ival = nv-2;
- 			while (ival && cval[ival]==' ') ival--;
- 			cval[++ival] = '\0';
- 		      }
diff --git a/sci-astronomy/esomidas/files/esomidas-fitswdm_c.patch b/sci-astronomy/esomidas/files/esomidas-fitswdm_c.patch
deleted file mode 100644
index 625208d08eff..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-fitswdm_c.patch
+++ /dev/null
@@ -1,48 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: fix nullification of fitswdm.c
- Fitswdm.c uses toNULLLONG to set an integer to some minimal value
- (funnily, not 0 but LONG_MIN!). However, this will lead to a wrong
- result if long!=int, since the argument is an int. On LinuxAMD64, this
- was fixed, but not generally. This patch make the special case for
- LinuxAMD64 as the general one.
---- a/prim/dio/libsrc/fitswdm.c
-+++ b/prim/dio/libsrc/fitswdm.c
-@@ -237,12 +237,7 @@
-          {                      /* NULL fill if needed  */
-          pi = p.i + ns;
-          i = n - ns;
--
--#ifdef LinuxAMD64
-          while (i--) toNULLINT (*pi++);
--#else
--         while (i--) toNULLLONG (*pi++);
--#endif
-          }
-       ioff += n;
-       np = 4 * ns;
-@@ -279,12 +274,7 @@
-          while (n--)
-          if (isNULLFLOAT (*pf))
-             {
--
--#ifdef LinuxAMD64
-             toNULLINT (*pi++);
--#else
--            toNULLLONG (*pi++);
--#endif
-             *pf++;
-             }
-          else
-@@ -332,12 +322,7 @@
-          while (n--)
-          if (isNULLFLOAT (*pd))
-             {
--
--#ifdef LinuxAMD64
-             toNULLINT (*pi++);
--#else
--            toNULLLONG (*pi++);
--#endif
-             *pd++;
-             }
-          else
diff --git a/sci-astronomy/esomidas/files/esomidas-gentoo-setup.patch b/sci-astronomy/esomidas/files/esomidas-gentoo-setup.patch
deleted file mode 100644
index 8b894bb2e597..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-gentoo-setup.patch
+++ /dev/null
@@ -1,14 +0,0 @@
---- a/install/unix/preinstall
-+++ b/install/unix/preinstall
-@@ -121,7 +121,10 @@
- urels=`(uname -r) 2>/dev/null`
- machine=`(uname -m) 2>/dev/null`
- 
--if [ "$uname" = "Darwin" ]; then
-+if [ -d "Gentoo" -a -f "/etc/gentoo-release" ];  then
-+    system="Gentoo"
-+
-+elif [ "$uname" = "Darwin" ]; then
-     system="Darwin"
- 
- elif [ "$machine" = "x86_64" ]; then
diff --git a/sci-astronomy/esomidas/files/esomidas-madrid.patch b/sci-astronomy/esomidas/files/esomidas-madrid.patch
deleted file mode 100644
index cd3d8bf3fb00..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-madrid.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Fix size of MADRID array in test
- When gfortran-6 is called with an optimization (-O1 or higher), arrays with a
- length 1 seem to be converted to a scalar and assumed to always return the same
- value.
- .
- This fails with the MADRID array, which is a placeholder for an array.
- Specifically ftoc_commf.for fails then, which leads to a missing ftoc_comm.h.
- .
- The simple workaround is to use a size > 1 here.
- .
- Note that the MADRID array is defined with a length=1 in ~350 places all over
- eso-midas. They are not changed yet since the verification succeeds. If we get
- strange bugreports, this may be considered as the problem.
---- a/system/ftoc-new/ftoc_commf.for
-+++ b/system/ftoc-new/ftoc_commf.for
-@@ -34,7 +34,7 @@
- C
-       PROGRAM F2CCOM
- C 
--      INTEGER    MADRID(1)
-+      INTEGER    MADRID(3)
-       INTEGER    VALUE(3)
-       INTEGER    STAT,MANY,NOPIX,NOBYT
-       INTEGER*8    PNTR
diff --git a/sci-astronomy/esomidas/files/esomidas-manpages.patch b/sci-astronomy/esomidas/files/esomidas-manpages.patch
deleted file mode 100644
index 466996df399e..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-manpages.patch
+++ /dev/null
@@ -1,54 +0,0 @@
-Author: Ole Streicher <debian@liska.ath.cx>
-Description: Put the manpages in chapter "1" instead of "1L".
- They are not local in Debian.
---- a/system/unix/man1/gomidas.1
-+++ b/system/unix/man1/gomidas.1
-@@ -2,7 +2,7 @@
- .\" Copyright (c) 1989 European Southern Observatory.
- .\" All rights reserved.  
- .\"
--.TH gomidas 1L "07 July 1993" MIDAS
-+.TH gomidas 1 "07 July 1993" MIDAS
- .SH NAME
- gomidas \- Resume a MIDAS session.
- .SH SYNOPSIS
-@@ -56,4 +56,4 @@
- .IP "\fBMID_WORK\fp"
- Startup directory for MIDAS containing previous MIDAS saved-session files.
- .SH SEE ALSO
--.IR inmidas(1L)
-+.IR inmidas(1)
---- a/system/unix/man1/helpmidas.1
-+++ b/system/unix/man1/helpmidas.1
-@@ -2,7 +2,7 @@
- .\" Copyright (c) 1989 European Southern Observatory.
- .\" All rights reserved.  
- .\"
--.TH helpmidas 1L "07 July 1993" MIDAS
-+.TH helpmidas 1 "07 July 1993" MIDAS
- .SH NAME
- helpmidas \- Standalone GUI help for MIDAS.
- .SH SYNOPSIS
-@@ -71,4 +71,4 @@
- .IP "\fBMID_WORK\fp"
- Startup directory for MIDAS.
- .SH SEE ALSO
--.IR inmidas(1L),gomidas(1L)
-+.IR inmidas(1),gomidas(1)
---- a/system/unix/man1/inmidas.1
-+++ b/system/unix/man1/inmidas.1
-@@ -2,7 +2,7 @@
- .\" Copyright (c) 1989 European Southern Observatory.
- .\" All rights reserved.  
- .\"
--.TH inmidas 1L "11 November 1994" MIDAS
-+.TH inmidas 1 "11 November 1994" MIDAS
- .SH NAME
- inmidas \- MIDAS start-up procedure for users.
- .SH SYNOPSIS
-@@ -145,4 +145,4 @@
- .IP "\fBMID_WORK\fp"
- Startup directory for MIDAS.
- .SH SEE ALSO
--.IR gomidas(1L)
-+.IR gomidas(1)
diff --git a/sci-astronomy/esomidas/files/esomidas-mdb_put.patch b/sci-astronomy/esomidas/files/esomidas-mdb_put.patch
deleted file mode 100644
index eceb4cbadff1..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-mdb_put.patch
+++ /dev/null
@@ -1,29 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Fix another probably off-by-one error in prim/dio/libsrc/fitsmdb.c
- This shall fix the following crash:
- .
-  ERROR: AddressSanitizer: global-buffer-overflow on address 0x7f5ae9867e28 at pc 0x7f5ae979569c bp 0x7fff8c3c744
-  READ of size 1 at 0x7f5ae9867e28 thread T0
-    #0 0x7f5ae979569b in mdb_put prim/dio/libsrc/fitsmdb.c:173
-    #1 0x7f5ae978f489 in fitsckw prim/dio/libsrc/fitsckw.c:872
-    #2 0x7f5ae97a3ee4 in fitsrhd prim/dio/libsrc/fitsrhd.c:258
-    #3 0x401ee4 in main prim/dio/src/infile.c:263
-    #4 0x7f5ae90bab44 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x21b44)
-    #5 0x4024e2 (prim/exec/infile.exe+0x4024e2)
-
-0x7f5ae9867e28 is located 0 bytes to the right of global variable '*.LC46' from 'fitsckw.c' (0x7f5ae9867e20) of size 8
-  '*.LC46' is ascii string 'COMMENT'
-0x7f5ae9867e28 is located 56 bytes to the left of global variable '*.LC47' from 'fitsckw.c' (0x7f5ae9867e60) of size 3
-  '*.LC47' is ascii string 'O_'
-
---- a/prim/dio/libsrc/fitsmdb.c
-+++ b/prim/dio/libsrc/fitsmdb.c
-@@ -170,7 +170,7 @@
- 
- ps = myptr->desc;
- pc = kwd->desc;
--for (i=0; i<MXMDN; i++) *ps++ = *pc++;
-+strncpy(ps, pc, MXMDN);
- 
- myptr->type = kwd->type;
- myptr->idx = kwd->idx;
diff --git a/sci-astronomy/esomidas/files/esomidas-no-sp_pty.patch b/sci-astronomy/esomidas/files/esomidas-no-sp_pty.patch
deleted file mode 100644
index c95893dfff37..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-no-sp_pty.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Dont compile gui/GraphLib/libsrc/uimxR5/src/sp_pty.c
- This file uses either nonportable termio, or sgtty which is not available
- everywhere (again, Hurd and FreeBSD are the examples here). In principle
- it could be rewritten to use termios (which is standard today); however
- the functions from this file are not needed in midas; therefore it is
- simpler just not to compile this.
---- a/gui/GraphLib/libsrc/uimxR5/src/makefile
-+++ b/gui/GraphLib/libsrc/uimxR5/src/makefile
-@@ -65,7 +65,6 @@
-         subproc.o\
- 	sp_utils.o\
- 	sp_spmd.o\
--	sp_pty.o\
- 	swidget.o \
-         t_error.o\
-         uimx.o\
diff --git a/sci-astronomy/esomidas/files/esomidas-no-strip.patch b/sci-astronomy/esomidas/files/esomidas-no-strip.patch
deleted file mode 100644
index 5a091ad8637c..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-no-strip.patch
+++ /dev/null
@@ -1,29 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Don't strip binaries during build
- This allows a debugging during packaging. The binaries are stripped
- later with dh_strip.
---- a/install/unix/install1
-+++ b/install/unix/install1
-@@ -536,9 +536,9 @@
-    fi
- else
-    echo "NOT FOUND."
--   echo "*** STRIP set to echo."
--   ed_moptions add STRIP=echo >/dev/null
- fi
-+echo "*** STRIP set to echo."
-+ed_moptions add STRIP=echo >/dev/null
- #*************** END: Checking the strip command **************
- 
- #*************** START: Checking the ranlib command ***********
---- a/install/unix/default_mk
-+++ b/install/unix/default_mk
-@@ -32,7 +32,7 @@
- LD77_OPT = $(LDFLAGS)
- LD77 = $(LD77_CMD) $(LD77_OPT)
- RANLIB = ranlib
--STRIP = strip
-+STRIP = echo
- AR = ar
- AR_OPT = ruv
- AR_XOPT = xv
diff --git a/sci-astronomy/esomidas/files/esomidas-nonlinux.patch b/sci-astronomy/esomidas/files/esomidas-nonlinux.patch
deleted file mode 100644
index e5f68f11e618..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-nonlinux.patch
+++ /dev/null
@@ -1,23 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Fixes for non-linux (kFreeBSD, Hurd)
---- a/system/unix/inmidas
-+++ b/system/unix/inmidas
-@@ -425,7 +425,7 @@
- #
- os=`uname`
- case "$os" in
--    "SunOS"|"Linux")
-+    SunOS|Linux|GNU|GNU/*)
- 	if [ -z "$LD_LIBRARY_PATH" ] ; then
- 	  LD_LIBRARY_PATH=$MIDASHOME/$MIDVERS/lib
- 	else
---- a/test/prim/veriall.prg
-+++ b/test/prim/veriall.prg
-@@ -204,6 +204,7 @@
-       write/keyw in_b MID_WORK:veriall_{out_b(1:{inputi})}.{inputc}

-    endif

- endif

-+write/keyw in_b  MID_WORK:veriall_debian.{inputc}

- open/file {in_b} write  fc

- if fc(1) .lt. 0 then

-    write/out Could not create file: "MID_WORK:veriall_{out_b}.{inputc} ..."

diff --git a/sci-astronomy/esomidas/files/esomidas-propagate-flags.patch b/sci-astronomy/esomidas/files/esomidas-propagate-flags.patch
deleted file mode 100644
index 3c918e22f4da..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-propagate-flags.patch
+++ /dev/null
@@ -1,86 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Propagate CFLAGS, CPPFLAGS, and FFLAGS
- This is done to enable hardening of the code. Also, use -fPIC only
- for shared library code.
---- a/install/unix/install1
-+++ b/install/unix/install1
-@@ -303,7 +303,7 @@
- ed_moptions delete C_OPT >/dev/null
- ed_moptions delete INSTALL_FLAG >/dev/null
- 
--ed_moptions add "C_OPT=-O $X_OPT"  >/dev/null
-+ed_moptions add "C_OPT=$X_OPT"  >/dev/null
- ed_moptions add "K_OPT= $X_OPT"  >/dev/null
- ed_moptions add "INSTALL_FLAG=auto" >/dev/null
- 
-@@ -331,12 +331,13 @@
- # 64 bit compiler
- else
-    echo installing Midas on a 64 bit system
--   MACH="-m64"
-+   MACH=" "
-    EO="-Z"
- fi
-  
- ed_moptions add "F77=gfortran $MACH" >/dev/null
--ed_moptions add "LD77_CMD=gfortran $MACH"  >/dev/null
-+ed_moptions add "LD77_CMD=gfortran $MACH $LDFLAGS"  >/dev/null
-+ed_moptions add "LDCC=gcc $LDFLAGS"  >/dev/null
- ed_moptions add "E_OPT= $EO"  >/dev/null
- 
- 
---- a/install/unix/default_mk
-+++ b/install/unix/default_mk
-@@ -49,10 +49,10 @@
- E_OPT =
- SYS =
- SH_CMD = echo
--SH_OPT =
-+SH_OPT = -fPIC
- SH_EXT = so.8.1
- CFLAGS += $(C_OPT) $(DEBUG) $(SYS) $(VARARGS) -I$(INC)
--FFLAGS = $(F_OPT) $(DEBUG) -c
-+FFLAGS += $(F_OPT) $(DEBUG) -c
- EFLAGS = $(E_OPT) -I$(INC) -I$(LINC) -f
- EXFLAGS = -f
- SLIB =
---- a/libsrc/ftoc-new/makefile
-+++ b/libsrc/ftoc-new/makefile
-@@ -21,6 +21,7 @@
- C_OPT =  $(K_OPT)
- 
- CFLAGS += $(C_OPT) $(DEBUG) $(SH_OPT) $(SYS) -I$(INC)
-+FFLAGS += $(SH_OPT)
- 
- LIB = $(LIBDIR)/libftoc.a
- 
---- a/libsrc/tbl/makefile
-+++ b/libsrc/tbl/makefile
-@@ -22,6 +22,7 @@
- include ../../local/default.mk
- 
- CFLAGS += $(C_OPT) $(SH_OPT) $(DEBUG) $(SYS) -I$(INC)
-+FFLAGS += $(SH_OPT)
- 
- HEADT = $(INC)/tblsys.h $(INC)/tbldef.h $(INC)/tblerr.h
- 
---- a/libsrc/agl/makefile
-+++ b/libsrc/agl/makefile
-@@ -28,6 +28,7 @@
- include ../../local/default.mk
- 
- CFLAGS += $(C_OPT) $(DEBUG) $(SH_OPT) $(OSSYS) $(SYS) -I$(INC) $(X11INC) -DMIDAS
-+FFLAGS += $(SH_OPT)
- 
- LIB = $(LIBDIR)/libagl3.a
- M = ../../system/exec
---- a/libsrc/plot/makefile
-+++ b/libsrc/plot/makefile
-@@ -15,6 +15,7 @@
- include ../../local/default.mk
- 
- CFLAGS += $(C_OPT) $(SH_OPT) $(DEBUG) $(SYS) -I$(INC)
-+FFLAGS += $(SH_OPT)
- 
- LIB =	$(LIBDIR)/libplot.a
- 
diff --git a/sci-astronomy/esomidas/files/esomidas-rarthm_for.patch b/sci-astronomy/esomidas/files/esomidas-rarthm_for.patch
deleted file mode 100644
index 9d4892a7bbd8..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-rarthm_for.patch
+++ /dev/null
@@ -1,43 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Wild-quess workaround for access violations in prim/general/libsrc/calc.for
- This is to hide the following problem:
- .
-  ERROR: AddressSanitizer: stack-buffer-overflow on address 0x7fffe7377ec4 at pc 0x40fb5c bp 0x7fffe7377350 sp 0x7fffe7377348
-READ of size 4 at 0x7fffe7377ec4 thread T0
-    #0 0x40fb5b in opffw_ prim/general/libsrc/calc.f:129
-    #1 0x40900b in rarthm prim/general/src/rarthm.f:402
-    #2 0x4038ec in main prim/general/src/rarthm.f:456
-    #3 0x7fed23b91b44 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x21b44)
-    #4 0x403c42 (prim/exec/rarthm.exe+0x403c42)
-
-Address 0x7fffe7377ec4 is located in stack of thread T0 at offset 1316 in frame
-    #0 0x40512f in rarthm prim/general/src/rarthm.f:1
-
-  This frame has 57 object(s):
-    [32, 36) 'uni'
-   [...]
-    [1184, 1188) 'rownoa'
-    [1248, 1252) 'rownob'
-    [1312, 1316) 'rowsiz' <== Memory access at offset 1316 overflows this variable
-    [1376, 1380) 'stat'
-    [1440, 1448) 'consta'
-    [1504, 1512) 'npixa'
-    [1568, 1576) 'npixb'
-    [1632, 1640) 'npixc'
-
---- a/prim/general/src/rarthm.for
-+++ b/prim/general/src/rarthm.for
-@@ -483,11 +483,11 @@
-       IF (OPERAT(1:1).NE.'Q') THEN
-          CALL OPFFW(OPERAT,MADRID(APNTR),MADRID(BPNTR),
-      +              MADRID(PNTRW),APIX,BPIX,CPIX,
--     +              ROWSIZ,ROWSIZ,ROWSIZ)
-+     +              NPIXA,NPIXB,NPIXC)
-       ELSE
-          CALL FN2FFW(OPERA(1:5),MADRID(APNTR),MADRID(BPNTR),
-      +               MADRID(PNTRW),APIX,BPIX,CPIX,
--     +               ROWSIZ,ROWSIZ,ROWSIZ)
-+     +               NPIXA,NPIXB,NPIXC)
-       ENDIF
- C
- C  put resulting row back into relevant ATOM
diff --git a/sci-astronomy/esomidas/files/esomidas-selechar_c.patch b/sci-astronomy/esomidas/files/esomidas-selechar_c.patch
deleted file mode 100644
index 63ff95318340..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-selechar_c.patch
+++ /dev/null
@@ -1,51 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Fix off-by-one initialization in prim/table/libsrc/selechar.c
- I am, however, not sure whether it is in charfun() in selechar.c or SCFMAP()
- in scfb.c.
- .
- It fixes the following crash:
- .
-  ERROR: AddressSanitizer: heap-buffer-overflow on address 0x61a00001f76c at pc 0x42ac5b bp 0x7fffb7a62330 sp 0x7fffb7a62328
-  WRITE of size 1 at 0x61a00001f76c thread T0
-    #0 0x42ac5a in charfun prim/table/libsrc/selechar.c:279
-    #1 0x4154f5 in level5 prim/table/libsrc/tbcomsel.c:797
-    #2 0x41572a in level4 prim/table/libsrc/tbcomsel.c:720
-    #3 0x415c57 in level3 prim/table/libsrc/tbcomsel.c:765
-    #4 0x415d1d in level2 prim/table/libsrc/tbcomsel.c:677
-    #5 0x41610e in level1 prim/table/libsrc/tbcomsel.c:636
-    #6 0x4165b0 in level0 prim/table/libsrc/tbcomsel.c:595
-    #7 0x41415d in level00 prim/table/libsrc/tbcomsel.c:555
-    #8 0x4179ff in tbl_comp prim/table/libsrc/tbcomsel.c:204
-    #9 0x4053fd in tk_cexec prim/edit/libsrc/tkeys.c:204
-    #10 0x404979 in main prim/table/src/tdatatbl.c:107
-    #11 0x7f1e97ae3b44 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x21b44)
-    #12 0x404d62 (prim/exec/tdatatbl.exe+0x404d62)
- .
-  0x61a00001f76c is located 0 bytes to the right of 1260-byte region [0x61a00001f280,0x61a00001f76c)
-allocated by thread T0 here:
-    #0 0x7f1e9858373f in malloc (/usr/lib/x86_64-linux-gnu/libasan.so.1+0x5473f)
-    #1 0x7f1e98241cf2 in SCFMAP libsrc/st/scfb.c:816
-    #2 0x42a0a3 in charfun prim/table/libsrc/selechar.c:250
-    #3 0x4154f5 in level5 prim/table/libsrc/tbcomsel.c:797
-    #4 0x41572a in level4 prim/table/libsrc/tbcomsel.c:720
-    #5 0x415c57 in level3 prim/table/libsrc/tbcomsel.c:765
-    #6 0x415d1d in level2 prim/table/libsrc/tbcomsel.c:677
-    #7 0x41610e in level1 prim/table/libsrc/tbcomsel.c:636
-    #8 0x4165b0 in level0 prim/table/libsrc/tbcomsel.c:595
-    #9 0x41415d in level00 prim/table/libsrc/tbcomsel.c:555
-    #10 0x4179ff in tbl_comp prim/table/libsrc/tbcomsel.c:204
-    #11 0x4053fd in tk_cexec prim/edit/libsrc/tkeys.c:204
-    #12 0x404979 in main prim/table/src/tdatatbl.c:107
-    #13 0x7f1e97ae3b44 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x21b44)
-
---- a/prim/table/libsrc/selechar.c
-+++ b/prim/table/libsrc/selechar.c
-@@ -247,7 +247,7 @@
- 	     nconst[ibuf[6]] = nchar;
- 	     items = nchar * ibuf[2];
-              SCFCRE(name,D_I1_FORMAT,F_X_MODE,F_IMA_TYPE,items,&imnoc[ibuf[6]]);
--             SCFMAP(imnoc[ibuf[6]],F_X_MODE,1,items,&act,&cdata[ibuf[6]]);
-+             SCFMAP(imnoc[ibuf[6]],F_X_MODE,1,items+1,&act,&cdata[ibuf[6]]);
- 	     }
- 	     if (nochar == 0) {
- 	       for (i=0, k=0; i<items; i+=nchar,k++) {
diff --git a/sci-astronomy/esomidas/files/esomidas-syskeys.patch b/sci-astronomy/esomidas/files/esomidas-syskeys.patch
deleted file mode 100644
index 96187d53a752..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-syskeys.patch
+++ /dev/null
@@ -1,23 +0,0 @@
-Author: Ole Streicher <debian@liska.ath.cx>
-Description: Write correct syskeys instead of patching in install/unix/setup
---- a/monit/syskeys.datorg
-+++ b/monit/syskeys.datorg
-@@ -60,7 +60,8 @@
- C (31:32) no. of bits for memory addresses (32 or 64)
- C SECT./END_OF_KEY
- MID$SYS/C/32/R
--Vax/VMS            $EDIT      32
-+PC/Linux            $vi       
-+C Vax/VMS            $EDIT      32
- C Sun/Solaris         $vi       32
- C HP/UX               $vi       32
- C PC/Linux            $vi       32
-@@ -426,7 +427,7 @@
- C $debugger debug_flags MID$EXE:module options
- C SECT./END_OF_KEY
- MID$DEBUG/C*40/3/R
--$dbx                                    
-+$gdb                                    
- ?                                       
- ?                                       
- C
diff --git a/sci-astronomy/esomidas/files/esomidas-system-readline.patch b/sci-astronomy/esomidas/files/esomidas-system-readline.patch
deleted file mode 100644
index da06a564aafa..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-system-readline.patch
+++ /dev/null
@@ -1,83 +0,0 @@
-Author: Ole Streicher <debian@liska.ath.cx>
-Description: Use the system provided readline instead of the copy 
- provided with the sources.
---- a/install/unix/install1
-+++ b/install/unix/install1
-@@ -576,7 +576,7 @@
- then
-   echo "OK."
-   ed_moptions replace "EDITSWITCH=-DEdit_dummy" >/dev/null
--  ed_moptions replace "EDITLIBS=-lzreadline -lncurses" >/dev/null
-+  ed_moptions replace "EDITLIBS=-lreadline" >/dev/null
- else
-   echo "Not found."
-   echo "*** WARNING: You'll not be able to edit Midas commands in the monitor."
-@@ -596,7 +596,7 @@
- 
-   if [ $answ = "c" -o  $answ = "C" ]; then
-     ed_moptions replace "EDITSWITCH=-DNO_READLINE" >/dev/null
--    ed_moptions replace "EDITLIBS=-lzreadline" >/dev/null
-+    ed_moptions replace "EDITLIBS=-lreadline" >/dev/null
-   else
-     exit 1
-   fi
---- a/install/unix/install1.sh
-+++ b/install/unix/install1.sh
-@@ -575,7 +575,7 @@
- then
-   echo "OK."
-   ed_moptions replace "EDITSWITCH=-DEdit_dummy" >/dev/null
--  ed_moptions replace "EDITLIBS=-lzreadline -lncurses" >/dev/null
-+  ed_moptions replace "EDITLIBS=-lreadline -lncurses" >/dev/null
- else
-   echo "Not found."
-   echo "*** WARNING: You'll not be able to edit Midas commands in the monitor."
-@@ -595,7 +595,7 @@
- 
-   if [ $answ = "c" -o  $answ = "C" ]; then
-     ed_moptions replace "EDITSWITCH=-DNO_READLINE" >/dev/null
--    ed_moptions replace "EDITLIBS=-lzreadline" >/dev/null
-+    ed_moptions replace "EDITLIBS=-lreadline" >/dev/null
-   else
-     exit 1
-   fi
---- a/monit/prepa2.c
-+++ b/monit/prepa2.c
-@@ -90,6 +90,9 @@
- #include <osxdef.h>		/* MIDAS osx definitions */
- #include <midback.h>		/* Context extructure */
- 
-+typedef int Function ();
-+typedef char **CPPFunction ();
-+
- extern int  is_a_tty;		/* Is this a terminal, (yes=1) set in prepa.c */
- 
- void using_history();
-@@ -238,7 +241,7 @@
-   if (!xhelp_pid) {
-     if ( (fd = fopen(channame[1],"r")) == (FILE *)NULL) {
-       (void) printf("\n\rTry first: CREATE/GUI HELP \n\r");
--      rl_refresh_line();
-+      rl_refresh_line(0,0);
-       return 0;
-       }
-     fscanf(fd,(const char *) "%d\n",&xhelp_pid);
-@@ -247,7 +250,7 @@
-       xhelp_pid = 0;
-       unlink(channame[1]);
-       (void) printf("\n\rTry first: CREATE/GUI HELP \n\r");
--      rl_refresh_line();
-+      rl_refresh_line(0,0);
-       return 0;
-       }
-     }
---- a/install/unix/core.cnf
-+++ b/install/unix/core.cnf
-@@ -15,7 +15,6 @@
- ./libsrc/st
- ./libsrc/tbl
- # ./libsrc/tw		FO's termwin library not used anymore...
--./libsrc/readline
- ./libsrc/agl
- ./libsrc/plot
- ./libsrc/display
diff --git a/sci-astronomy/esomidas/files/esomidas-x11-include-path.patch b/sci-astronomy/esomidas/files/esomidas-x11-include-path.patch
deleted file mode 100644
index 06aaab938c4c..000000000000
--- a/sci-astronomy/esomidas/files/esomidas-x11-include-path.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Add /usr/include/X11 to the X11 include paths
---- a/install/unix/install1
-+++ b/install/unix/install1
-@@ -615,7 +615,7 @@
-   x11incl="found"
- else
-   ed_moptions delete X11INC >/dev/null
--  x11inclpth='/usr/openwin/include /usr/include/X11R6 /usr/include/X11R5 /usr/X11R6/include /usr/X11R6/include/X11 /usr/X11R5/include /usr/local/include /include /usr/X/include /opt/X-local/include'
-+  x11inclpth='/usr/include/X11 /usr/include/X11R6 /usr/include/X11R5 /usr/X11R6/include /usr/X11R6/include/X11 /usr/X11R5/include /usr/local/include /include /usr/X/include /opt/X-local/include'
-   for dir in $x11inclpth
-   do
-     if [ ! -d $dir ]; then