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* sci-libs/hdf: Stabilize 4.2.15-r1 amd64, #816390Sam James2021-12-091-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/liborigin: no static libsAndrew Ammerlaan2021-12-082-7/+17
| | | | | | Closes: https://bugs.gentoo.org/828534 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/hdf: keyword ~riscvYixun Lan2021-12-081-1/+1
| | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/hdf: fix riscv64 test errorYixun Lan2021-12-082-2/+3
| | | | | | | | | the original patch took from https://sources.debian.org/patches/libhdf4/4.2.15-4/riscv64.diff/ Bug: https://bugs.gentoo.org/664856 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/hdf: Keyword 4.2.15-r1 arm, #804927Sam James2021-12-081-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf: Stabilize 4.2.15-r1 ppc, #816390Sam James2021-12-081-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: Stabilize 3.10.0 arm, #828397Sam James2021-12-081-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf: fix typoSam James2021-12-081-1/+1
| | | | | | | Had switched it back to ${FILESDIR} to add an extra patch but forgot to switch it back again apparently. Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf: drop -riscv for 4.2.15-r1 with new arch. supportSam James2021-12-081-1/+1
| | | | | | | | | This should now support riscv, but will leave keywording for the arch team of course. But dropping -riscv as it's no longer known-broken. Bug: https://bugs.gentoo.org/664856 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf: support additional architecturesSam James2021-12-082-0/+83
| | | | | | | | | | | | | | | | | | | | | | | Pull in patches from Fedora [0] and Debian [1] with some simple rebasing (added riscv, hppa, sparc64 by cherry-picking extra bits too). All references included in the respective patches within the patch tarball too. This should, in total, give us: - hppa - sparc{,64} - arm - arm64 - ppc - ppc64(le?) - s390 [0] https://src.fedoraproject.org/rpms/hdf/tree/rawhide [1] https://sources.debian.org/patches/libhdf4/4.2.15-4/ Bug: https://bugs.gentoo.org/664856 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/liborigin: fix header location in pc fileAndrew Ammerlaan2021-12-071-3/+13
| | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/liborigin: fix .pc fileAndrew Ammerlaan2021-12-071-0/+13
| | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/liborigin: add new snapshotAndrew Ammerlaan2021-12-073-0/+93
| | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/fftw: x86 stable wrt bug #821916Agostino Sarubbo2021-12-071-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/scotch: Stabilize 6.1.0-r1 ppc, #818649Sam James2021-12-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/dealii: add a blocker for boost-1.77Matthias Maier2021-12-062-0/+2
| | | | | | | | | Boost version 1.77 has multiple unresolved issues in their geometry package. Disallow for now until upstream has found a workaround. Bug: https://bugs.gentoo.org/820821 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/scotch: Stabilize 6.1.0-r1 ppc64, #818649Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.3.3 arm64, #828398Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: Stabilize 3.10.0 arm64, #828397Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: Stabilize 8.2.0 arm64, #828396Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: ppc64 stable wrt bug #828398Agostino Sarubbo2021-12-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: x86 stable wrt bug #828398Agostino Sarubbo2021-12-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: x86 stable wrt bug #828397Agostino Sarubbo2021-12-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/proj: x86 stable wrt bug #828396Agostino Sarubbo2021-12-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 amd64, #821916Jakov Smolić2021-12-061-1/+1
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/gdal: ppc stable wrt bug #828398Agostino Sarubbo2021-12-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: Stabilize 3.10.0 ppc64, #828397Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: Stabilize 8.2.0 ppc64, #828396Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: Stabilize 3.10.0 ppc, #828397Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: Stabilize 8.2.0 ppc, #828396Sam James2021-12-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 arm, #821916Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 ppc64, #821916Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 ppc, #821916Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.3.3 amd64, #828398Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 arm64, #821916Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: Stabilize 3.10.0 amd64, #828397Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: Stabilize 8.2.0 amd64, #828396Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Stabilize 3.3.10 sparc, #821916Arthur Zamarin2021-12-051-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/lrslib: Stabilize 071b-r1 amd64, #828270Sam James2021-12-051-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: conditionally build testsSam James2021-12-041-2/+4
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: add 3.22.0Sam James2021-12-043-0/+80
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: [QA] Revert "fix build with new deps versions"Sam James2021-12-039-3303/+0
| | | | | | | | | | | | | | | | | | | | | | This reverts commit 4893345530421b0d6168b5278d57d69fc08f7fdf. Rationale: - Several patches far beyond the size limit; - Change was NAKed on IRC; - A PR is in progress for a newer version which would require fewer patches; - Invasive patches which aren't strictly needed. They add compatibility for newer versions of some software, but most of this comes with VTK 9.1 (for which, as mentioned, there's a PR well in progress by the maintainer) and we can apply a smaller set of patches to that version if required. - Missing sign-off / provenance for some patches; Bug: https://bugs.gentoo.org/827310 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: fix build with new deps versionsVadim Misbakh-Soloviov2021-12-049-0/+3303
| | | | | | | | | | | | | | | Mostly backported upstream patches (from 9.1.0 and post-9.1). Also, some patches (like CUDA-11.5) was provided by Vyacheclav Perestoronin <perestoronin@gmail.com> and slightly adapted by me. Actually, there is already PR for 9.1.0, which have most of this compatibility issues fixed, but I bump 9.0.3 to work with them in case if there is some revdeps still not compatible with 9.1 API/ABI. Bug: https://bugs.gentoo.org/827310 Package-Manager: Portage-3.0.28, Repoman-3.0.1 Signed-off-by: Vadim Misbakh-Soloviov <mva@gentoo.org>
* sci-libs/gsl: fix subslot for 2.7.1Sam James2021-12-021-1/+2
| | | | | | | I thought I'd done this but apparently not. Closes: https://bugs.gentoo.org/828023 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gmsh: add GCC 11 patchSam James2021-12-022-0/+84
| | | | | | | | Seems to build fine without this for me but it's reasonable, upstream, and seems to help others. Closes: https://bugs.gentoo.org/800536 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/lapack: Drop 3.8.0 and 3.9.0-r1Andreas Sturmlechner2021-12-023-192/+0
| | | | | | Closes: https://bugs.gentoo.org/733580 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/lapack: Stabilize 3.10.0 x86, #733580Arthur Zamarin2021-12-021-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/lapack: amd64 stable wrt bug #733580Agostino Sarubbo2021-12-021-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/blis: bump version to 0.8.1Zhang Zongyu2021-12-023-0/+122
| | | | | | | | Closes: https://github.com/gentoo/gentoo/pull/23106 Closes: https://bugs.gentoo.org/764098 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Zhang Zongyu <zongyu@novazy.net> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/spqr: pin to older TBBSam James2021-12-021-1/+1
| | | | | Bug: https://bugs.gentoo.org/825514 Signed-off-by: Sam James <sam@gentoo.org>