diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/primer3/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/primer3/Manifest | 8 | ||||
| -rw-r--r-- | sci-biology/primer3/primer3-1.0.0.ebuild | 4 | ||||
| -rw-r--r-- | sci-biology/primer3/primer3-1.1.4.ebuild | 33 |
4 files changed, 47 insertions, 7 deletions
diff --git a/sci-biology/primer3/ChangeLog b/sci-biology/primer3/ChangeLog index 9ad8bc38fdfb..3f84a3873cea 100644 --- a/sci-biology/primer3/ChangeLog +++ b/sci-biology/primer3/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/primer3 -# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.17 2007/06/28 15:51:24 ribosome Exp $ +# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.18 2008/08/26 19:08:09 ribosome Exp $ + +*primer3-1.1.4 (26 Aug 2008) + + 26 Aug 2008; Olivier Fisette <ribosome@gentoo.org> +primer3-1.1.4.ebuild: + New upstream version. *primer3-1.1.1 (28 Jun 2007) diff --git a/sci-biology/primer3/Manifest b/sci-biology/primer3/Manifest index 8f0e232d3477..72e7f2aca08b 100644 --- a/sci-biology/primer3/Manifest +++ b/sci-biology/primer3/Manifest @@ -1,8 +1,10 @@ -DIST primer3-1.1.1.tar.gz 965103 RMD160 c339f779f7183c84db6b3a5104f5b0ba6269abed SHA1 5ebf6ea15b2a2e24e3807a30849405c477894771 SHA256 58eb0ac4a6537246b7111023c63d4e32022bd272adac9197c042abe0c2572d82 +DIST primer3-1.1.1.tar.gz 583253 RMD160 e11abaf7b9a805ed02e40b43bcde4756d8703831 SHA1 ac2ab94255e312fbb2f30920ba117b92d19ff909 SHA256 fd765e04bcbf71f1836926453122604864007168262ddadc5cf0faa894a4f8d7 +DIST primer3-1.1.4.tar.gz 974628 RMD160 87535d123d4c00b64eb763e4e567c5c83fde6b54 SHA1 fcabf7d8aa31c5568bd130b318c3ead4a1b9aa3a SHA256 1cb045791afd3c4033956a65687ca0c1b1a6607ac84705bf4ed7d7151691980b DIST primer3_1.0.0.tar.gz 936696 RMD160 c08329cafcb8bf702a1654b4348a418b20e55c88 SHA1 0227f1f26c8b45dff9033543bee4387ade173c73 SHA256 fcbcf2e540e0062f3fa0d723b443b04a1c31e3e03e3aa5d97e3b2f910499f34b DIST primer3_1.0.1.tar.gz 902576 RMD160 aef14e5f3346c3a2c92e83620c5f1ecb4b5f7630 SHA1 ee8680e3ca38ab3675eb35ce576b6d9541ed9fd8 SHA256 2f7641d66d75b4830a01d31dbc96c61ffad2b1f047287009906902558a9e165e -EBUILD primer3-1.0.0.ebuild 736 RMD160 4e77d9b17865d72724caa68e184ffd38185b38ad SHA1 29d7e8c64ac18916b2c45cfa8dd8c90c841991d7 SHA256 9308800ad4550154c4900ac1e972e7b0c3a387c1d5643d72e317465b77b45080 +EBUILD primer3-1.0.0.ebuild 737 RMD160 1272a7c0f374709842089c42eb6259e1a5f5d8ae SHA1 02176df438d96fcf199a2ab10afa3e233ad224c5 SHA256 15d1a3be8db86847824d344970b9e9e41140537132198b829c5239f97176306e EBUILD primer3-1.0.1.ebuild 811 RMD160 996ced49e9106ceb7726147fdc9ab0bbbcc63e64 SHA1 7ca0591608eabb9ddd2cc85eb9de46c020286610 SHA256 464d62a61c619f230946236eda3152c58abc75015e49d17bd40d7390968bc0b3 EBUILD primer3-1.1.1.ebuild 791 RMD160 863f43897a45754d044392cab78029064b6b62ef SHA1 9c09cee6c909f66604ac0252d3b6e6b56f9f1234 SHA256 93f656f95c5b01630b259b8fd662159612786fcdf5ff9c4e12e09722ccb44705 -MISC ChangeLog 2723 RMD160 e0212c0568df1cfc1cae84e2c1cd26bd27968e1d SHA1 da6181df649450037646b576252fb7ea2240a682 SHA256 a804d5020eafadc741195b99fa38319c3a6700fea6c6fe6898df7a44dec78968 +EBUILD primer3-1.1.4.ebuild 786 RMD160 9af90a4b43890da660ea122f3aeaf7fea99f9140 SHA1 4826abdfb99da24efa9ede8b6436f60d141062fb SHA256 52e551c92f57d53e0a170fde58b0517b3107c00938fd87d31b787e61e186284c +MISC ChangeLog 2854 RMD160 19854a29af0f5ab893ded2be7fb96fd927ab372a SHA1 e0ac8898f01941b68038e74748284d8d8ef297d2 SHA256 7c4f628ff72668e8c36a67d0236e5d4ab15e782ac728e822859fd497c2a8842a MISC metadata.xml 721 RMD160 52ec41dfbf0405bbf4d209a6c940ed519ef90f09 SHA1 7c1c44b75d2cf8549959e2947509e58cd6c433ed SHA256 0add5594c686e3cf605ad8bba0ab855d92bbf75e019ef8b79c3ca802164244ca diff --git a/sci-biology/primer3/primer3-1.0.0.ebuild b/sci-biology/primer3/primer3-1.0.0.ebuild index 137627bf9d84..353e65dbb97e 100644 --- a/sci-biology/primer3/primer3-1.0.0.ebuild +++ b/sci-biology/primer3/primer3-1.0.0.ebuild @@ -1,6 +1,6 @@ -# Copyright 1999-2007 Gentoo Foundation +# Copyright 1999-2008 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-1.0.0.ebuild,v 1.13 2008/02/07 14:52:58 grobian Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-1.0.0.ebuild,v 1.14 2008/08/26 19:08:09 ribosome Exp $ DESCRIPTION="Design primers for PCR reactions." HOMEPAGE="http://primer3.sourceforge.net/" diff --git a/sci-biology/primer3/primer3-1.1.4.ebuild b/sci-biology/primer3/primer3-1.1.4.ebuild new file mode 100644 index 000000000000..717739b2f708 --- /dev/null +++ b/sci-biology/primer3/primer3-1.1.4.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-1.1.4.ebuild,v 1.1 2008/08/26 19:08:09 ribosome Exp $ + +DESCRIPTION="Design primers for PCR reactions." +HOMEPAGE="http://primer3.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" +LICENSE="whitehead" + +SLOT="0" +KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86" +IUSE="" + +DEPEND="dev-lang/perl" + +RDEPEND="" + +S="${WORKDIR}/src" + +src_compile() { + emake -e || die +} + +src_test () { + make primer_test || die +} + +src_install () { + dobin long_seq_tm_test ntdpal oligotm primer3_core || die \ + "Could not install program." + dodoc ../{how-to-cite.txt,README.txt,example} || die \ + "Could not install documentation." +} |