From 3d8be1ef0ec993ec064a314c9ad80271356e552a Mon Sep 17 00:00:00 2001 From: Justin Lecher Date: Thu, 21 Jul 2011 19:04:04 +0000 Subject: Some cleanup Package-Manager: portage-2.2.0_alpha46/cvs/Linux x86_64 --- sci-chemistry/pdb-extract/ChangeLog | 8 ++++++-- sci-chemistry/pdb-extract/Manifest | 20 ++++++++++---------- sci-chemistry/pdb-extract/metadata.xml | 2 +- sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild | 8 ++++++-- .../pdb-extract/pdb-extract-3.004-r1.ebuild | 19 ++++++++----------- .../pdb-extract/pdb-extract-3.004-r2.ebuild | 15 ++++++++------- 6 files changed, 39 insertions(+), 33 deletions(-) (limited to 'sci-chemistry/pdb-extract') diff --git a/sci-chemistry/pdb-extract/ChangeLog b/sci-chemistry/pdb-extract/ChangeLog index b9c98dda5f0e..de7d9d8a78c6 100644 --- a/sci-chemistry/pdb-extract/ChangeLog +++ b/sci-chemistry/pdb-extract/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/pdb-extract -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.16 2010/06/15 14:45:45 jlec Exp $ +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.17 2011/07/21 19:04:04 jlec Exp $ + + 21 Jul 2011; Justin Lecher pdb-extract-1.700.ebuild, + pdb-extract-3.004-r1.ebuild, pdb-extract-3.004-r2.ebuild, metadata.xml: + Some cleanup *pdb-extract-3.004-r2 (15 Jun 2010) diff --git a/sci-chemistry/pdb-extract/Manifest b/sci-chemistry/pdb-extract/Manifest index ec5d0ffebddb..1d1514ad35e7 100644 --- a/sci-chemistry/pdb-extract/Manifest +++ b/sci-chemistry/pdb-extract/Manifest @@ -1,5 +1,5 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 +Hash: SHA512 AUX pdb-extract-3.004-Makefile.patch 1530 RMD160 ba4b642e37c26643dd682288f16db6fa9178cd6d SHA1 d50fb483a835a0a2c98e8306050fbfa10bbc6ef8 SHA256 b1e30c706e90757c436617af595e1dd79e3eb79e3e7449ef64dee757ebb04db7 AUX pdb-extract-3.004-cflags-install.patch 7218 RMD160 c596e67b38f4058d69fd0e9626450a57dcef629d SHA1 f6a86b03ed9797d60278ba9466f66d4b255c6789 SHA256 cac3cf50b6fbf21dd03e096a9c02f9b4280e46818307c9452c6b4f4e988ed206 @@ -8,15 +8,15 @@ AUX pdb-extract-3.004-gcc-4.3.patch 573 RMD160 a9d563b1834bf6293568793a1895026f5 AUX respect-cflags-and-fix-install.patch 8415 RMD160 b1418278385f197db26a49be4bf1ad2bbed4b4c0 SHA1 93bd785a4683542716309d917335de7a9c3573d4 SHA256 ab44177b9a9e34573331aafeb112efa86154a0c1ee706930aa05c32c0eb1e58b DIST pdb-extract-v1.700-prod-src.tar.gz 9081548 RMD160 c565de9af1cea09ccf0bd59527191fc76a4b7aa1 SHA1 27eedd1d46e95e7006c90694e379bdcb4f20fd92 SHA256 b35d2bf5d7f96580782a3645ab288aec1be21926bf52969f4de74d4f514a471c DIST pdb-extract-v3.004-prod-src.tar.gz 942450 RMD160 3d5d46e668a52109678fdf59afbe664dac1643f9 SHA1 7b5d7ce200d33e68fa352cd3658e382bc37e9768 SHA256 58bef2aba4869cdd16a79ddc588da5596a2ccd1f5c925f300b63b6d8299bb953 -EBUILD pdb-extract-1.700.ebuild 1457 RMD160 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v2.0.15 (GNU/Linux) +Version: GnuPG v2.0.17 (GNU/Linux) -iEYEARECAAYFAkwXkh8ACgkQgAnW8HDreRYcKQCcDr/oOXby/1GQIfMLDUlP8bXC -xdwAn0Pm3EFBG6oCjqJ60PfUmKMNHmxH -=D2JH +iEYEAREKAAYFAk4oeCoACgkQgAnW8HDreRYUxwCgkJ5LP8V/MbEKBwRLa6RUyJeP +vr0An3inHlXbHPS2pF3qfblBYot/+TnQ +=3WtG -----END PGP SIGNATURE----- diff --git a/sci-chemistry/pdb-extract/metadata.xml b/sci-chemistry/pdb-extract/metadata.xml index 9ac9ffdb3a41..e42d0af60f42 100644 --- a/sci-chemistry/pdb-extract/metadata.xml +++ b/sci-chemistry/pdb-extract/metadata.xml @@ -1,5 +1,5 @@ -sci-chemistry + sci-chemistry diff --git a/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild b/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild index 0e20b9966052..0aa1036a20b2 100644 --- a/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild +++ b/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild @@ -1,21 +1,25 @@ -# Copyright 1999-2008 Gentoo Foundation +# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild,v 1.6 2008/07/02 01:39:27 dberkholz Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild,v 1.7 2011/07/21 19:04:04 jlec Exp $ inherit eutils toolchain-funcs multilib MY_P="${PN}-v${PV}-prod-src" + DESCRIPTION="Tools for extracting mmCIF data from structure determination applications" HOMEPAGE="http://sw-tools.pdb.org/apps/PDB_EXTRACT/index.html" SRC_URI="http://sw-tools.pdb.org/apps/PDB_EXTRACT/${MY_P}.tar.gz" + LICENSE="PDB" SLOT="0" KEYWORDS="~amd64 ppc x86" IUSE="" + RDEPEND="" DEPEND="${RDEPEND} sci-libs/cifparse-obj" PDEPEND="sci-libs/rcsb-data" + S="${WORKDIR}/${MY_P}" src_unpack() { diff --git a/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild b/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild index 2748393fd723..471f70af534b 100644 --- a/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild +++ b/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2010 Gentoo Foundation +# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v 1.1 2010/04/25 09:53:47 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v 1.2 2011/07/21 19:04:04 jlec Exp $ -EAPI="3" +EAPI=3 inherit eutils toolchain-funcs multilib prefix @@ -24,10 +24,11 @@ DEPEND="${RDEPEND} S="${WORKDIR}/${MY_P}" src_prepare() { - epatch "${FILESDIR}"/${P}-cflags-install.patch - epatch "${FILESDIR}"/${P}-gcc-4.3.patch - epatch "${FILESDIR}"/${P}-Makefile.patch - epatch "${FILESDIR}"/${P}-env.patch + epatch \ + "${FILESDIR}"/${P}-cflags-install.patch \ + "${FILESDIR}"/${P}-gcc-4.3.patch \ + "${FILESDIR}"/${P}-Makefile.patch \ + "${FILESDIR}"/${P}-env.patch sed -i "s:GENTOOLIBDIR:$(get_libdir):g" \ pdb-extract-v3.0/Makefile \ @@ -50,10 +51,6 @@ src_prepare() { eprefixify pdb-extract-v3.0/Makefile etc/* } -src_compile() { - emake || die "make failed" -} - src_install() { dobin bin/pdb_extract{,_sf} \ || die "failed to install binaries" diff --git a/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild b/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild index 74c976e00fd8..de5bf3201034 100644 --- a/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild +++ b/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2010 Gentoo Foundation +# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild,v 1.1 2010/06/15 14:45:45 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild,v 1.2 2011/07/21 19:04:04 jlec Exp $ -EAPI="3" +EAPI=3 inherit eutils toolchain-funcs multilib prefix @@ -24,10 +24,11 @@ DEPEND="${RDEPEND} S="${WORKDIR}/${MY_P}" src_prepare() { - epatch "${FILESDIR}"/${P}-cflags-install.patch - epatch "${FILESDIR}"/${P}-gcc-4.3.patch - epatch "${FILESDIR}"/${P}-Makefile.patch - epatch "${FILESDIR}"/${P}-env.patch + epatch \ + "${FILESDIR}"/${P}-cflags-install.patch \ + "${FILESDIR}"/${P}-gcc-4.3.patch \ + "${FILESDIR}"/${P}-Makefile.patch \ + "${FILESDIR}"/${P}-env.patch sed -i "s:GENTOOLIBDIR:$(get_libdir):g" \ pdb-extract-v3.0/Makefile \ -- cgit v1.2.3-65-gdbad