# ChangeLog for sys-cluster/openmpi # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v 1.121 2013/07/09 22:28:16 jsbronder Exp $ 09 Jul 2013; Justin Bronder openmpi-1.4.3.ebuild, openmpi-1.4.4.ebuild, openmpi-1.4.5.ebuild, openmpi-1.6.3.ebuild, openmpi-1.6.4-r1.ebuild: add sys-cluster/mpich blocker 02 Jul 2013; Justin Bronder openmpi-1.6.4-r1.ebuild, files/hooks-disable-malloc-override-inside-of-Gentoo-sandb.patch: Update patch per sandbox team, link to upstream tickets. *openmpi-1.6.4-r1 (02 Jul 2013) 02 Jul 2013; Justin Bronder -openmpi-1.6.4.ebuild, +openmpi-1.6.4-r1.ebuild, +files/hooks-disable-malloc-override-inside-of-Gentoo-sandb.patch: Do not override malloc when in a sandbox environment. Resolves #462602. 05 Apr 2013; Justin Bronder openmpi-1.6.4.ebuild: Export FAKEROOTKEY in src_test to workaround hang in sandbox. See #462602. *openmpi-1.6.4 (21 Mar 2013) *openmpi-1.4.5 (21 Mar 2013) 21 Mar 2013; Alexey Shvetsov +openmpi-1.4.5.ebuild, +openmpi-1.6.4.ebuild, openmpi-1.4.3.ebuild: Version bump for 1.4 and 1.6 series. Fix bug #462144 10 Jan 2013; Justin Bronder -openmpi-1.5.5.ebuild, -openmpi-1.6-r1.ebuild, -openmpi-1.6.1.ebuild, -openmpi-1.6.2.ebuild: cleanup old *openmpi-1.6.3 (30 Dec 2012) 30 Dec 2012; Kacper Kowalik +openmpi-1.6.3.ebuild: Version bump 16 Oct 2012; Justin Lecher openmpi-1.4.3.ebuild, openmpi-1.4.4.ebuild, openmpi-1.5.5.ebuild, openmpi-1.6-r1.ebuild, openmpi-1.6.1.ebuild, openmpi-1.6.2.ebuild: Remove virtual/fortran and always call fortran-2_pkg_setup as intend by the updated fortran-2.eclass 14 Oct 2012; Justin Lecher openmpi-1.6.2.ebuild, metadata.xml: Missed one ebuild for fortran 14 Oct 2012; Justin Lecher openmpi-1.4.3.ebuild, openmpi-1.4.4.ebuild, openmpi-1.5.5.ebuild, openmpi-1.6-r1.ebuild, openmpi-1.6.1.ebuild: Prepare for fortran2.eclass update *openmpi-1.6.2 (07 Oct 2012) 07 Oct 2012; Alexey Shvetsov +openmpi-1.6.2.ebuild: [sys-cluster/openmpi] Version bump 24 Sep 2012; Justin Bronder -openmpi-1.4.2.ebuild, -openmpi-1.5.4-r3.ebuild: remove old *openmpi-1.6.1 (24 Sep 2012) 24 Sep 2012; Justin Bronder +openmpi-1.6.1.ebuild: bump to 1.6.1 25 Jun 2012; Justin Bronder openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild, openmpi-1.4.4.ebuild, openmpi-1.5.4-r3.ebuild, openmpi-1.5.5.ebuild, openmpi-1.6-r1.ebuild: Drop blockers (sys-cluster/mpich and sys-cluster/lam-mpi) that are no longer in the tree. *openmpi-1.6-r1 (10 Jun 2012) 10 Jun 2012; Kacper Kowalik +files/openmpi-1.6-hostfile.patch, +openmpi-1.6-r1.ebuild, -openmpi-1.6.ebuild: Add patch from upstream to fix default hostfile location wrt #420431 by William Throwe 30 May 2012; Alexis Ballier openmpi-1.6.ebuild: keyword ~amd64-fbsd *openmpi-1.6 (29 May 2012) 29 May 2012; Alexey Shvetsov +openmpi-1.6.ebuild: [sys-cluster/openmpi] Version bump 19 Apr 2012; Alexey Shvetsov openmpi-1.5.5.ebuild: [sys-cluster/openmpi] Add missing use conditional dep *openmpi-1.5.5 (18 Apr 2012) 18 Apr 2012; Alexey Shvetsov +openmpi-1.5.5.ebuild, openmpi-1.5.4-r3.ebuild: [sys-cluster/openmpi] Version bump. Also introduce new USE EXPAND for openmpi 31 Mar 2012; Raúl Porcel openmpi-1.4.3.ebuild: alpha/ia64/sparc/x86 stable wrt #402095 12 Mar 2012; Brent Baude openmpi-1.4.3.ebuild: Marking openmpi-1.4.3 ppc64 for bug 402095 07 Mar 2012; Brent Baude openmpi-1.4.3.ebuild: Marking openmpi-1.4.3 ppc for bug 402095 04 Feb 2012; Agostino Sarubbo openmpi-1.4.3.ebuild: Stable for amd64, wrt bug #402095 *openmpi-1.5.4-r3 (03 Feb 2012) 03 Feb 2012; Justin Bronder -openmpi-1.5.4-r2.ebuild, +openmpi-1.5.4-r3.ebuild: cleanup *openmpi-1.4.4 (03 Feb 2012) 03 Feb 2012; Justin Bronder +openmpi-1.4.4.ebuild: version bump (#398383) 03 Feb 2012; Justin Bronder -openmpi-1.5.3.ebuild, -openmpi-1.5.3-r1.ebuild, -openmpi-1.5.3-r2.ebuild, -openmpi-1.5.4.ebuild, -openmpi-1.5.4-r1.ebuild: cleanup old *openmpi-1.5.4-r2 (20 Jan 2012) 20 Jan 2012; Alexey Shvetsov +openmpi-1.5.4-r2.ebuild, metadata.xml: Add support for knem open-mx and psm 17 Dec 2011; Fabian Groffen openmpi-1.5.4-r1.ebuild: Complete some Prefix related fixes *openmpi-1.5.4-r1 (17 Dec 2011) 17 Dec 2011; Alexey Shvetsov +openmpi-1.5.4-r1.ebuild: Add some prefix related fixes 31 Aug 2011; Alexey Shvetsov +openmpi-1.5.4.ebuild: Version bump *openmpi-1.5.4 (31 Aug 2011) 31 Aug 2011; Alexey Shvetsov +openmpi-1.5.4.ebuild: Version bump 10 Jul 2011; Alexis Ballier openmpi-1.5.3-r2.ebuild: keyword ~x86-fbsd, bug #372885 *openmpi-1.5.3-r2 (03 Jul 2011) 03 Jul 2011; Alexey Shvetsov +openmpi-1.5.3-r2.ebuild: Add slurm support 02 Jul 2011; Alexey Shvetsov openmpi-1.5.3-r1.ebuild: Fix hwloc location detection 02 Jul 2011; Alexey Shvetsov openmpi-1.5.3-r1.ebuild: Add ~amd64-linux keyword *openmpi-1.5.3-r1 (01 Jul 2011) 01 Jul 2011; Alexey Shvetsov +openmpi-1.5.3-r1.ebuild, metadata.xml: Add infiniband and sctp support 24 Jun 2011; Kacper Kowalik openmpi-1.5.3.ebuild: Dropped ~xf86-fbsd wrt #372885 24 Jun 2011; Justin Lecher openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild, openmpi-1.5.3.ebuild: Do not check for fortran unconditionally, #372849 21 Jun 2011; Justin Lecher openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild, openmpi-1.5.3.ebuild: Add dependency on virtual/fortran 21 Jun 2011; Justin Lecher openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild, openmpi-1.5.3.ebuild: Added fortran-2.eclass support 28 Mar 2011; Justin Bronder +files/openmpi-r24328.patch, openmpi-1.5.3.ebuild: Fix hardened test failure (#360185). 22 Mar 2011; Justin Bronder openmpi-1.5.3.ebuild: Remove libtool if it was installed by USE=vt, bug #359917. *openmpi-1.5.3 (22 Mar 2011) 22 Mar 2011; Justin Bronder +openmpi-1.5.3.ebuild: Version bump (#349076). Remove unnecessary test restriction. Use system hwloc library. 14 Jan 2011; Kacper Kowalik openmpi-1.4.2.ebuild: ppc64 stable wrt #337129, drop old. 10 Jan 2011; Brent Baude openmpi-1.4.2.ebuild: stable ppc, bug 337129 19 Dec 2010; Justin Lecher openmpi-1.4.1.ebuild, openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild: Fix for EPREFIX with whitespaces, thanks Arfrever for help 16 Dec 2010; Justin Lecher openmpi-1.4.1.ebuild, openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild: Removal of fortran.eclass, #348851 05 Dec 2010; Raúl Porcel openmpi-1.4.2.ebuild: ia64 stable wrt #337129 24 Oct 2010; Kacper Kowalik openmpi-1.4.2.ebuild, openmpi-1.4.3.ebuild: Drop epause from ebuild using EAPI=3 wrt bug 342465. Don't log empty lines *openmpi-1.4.3 (11 Oct 2010) 11 Oct 2010; Justin Bronder +openmpi-1.4.3.ebuild: Bump bugfix release, remove xgrid as it's not longer supported. 10 Oct 2010; Raúl Porcel openmpi-1.4.2.ebuild: alpha/sparc stable wrt #337129 15 Sep 2010; Christian Faulhammer openmpi-1.4.2.ebuild: stable x86, bug 337129 14 Sep 2010; Markos Chandras openmpi-1.4.2.ebuild: Stable on amd64 wrt bug #337129 08 Jul 2010; Justin Bronder openmpi-1.4.2.ebuild: Fix sysconfdir for prefix. Thanks to rei4dan on #gentoo-science *openmpi-1.4.2 (30 Jun 2010) 30 Jun 2010; Justin Bronder +openmpi-1.4.2.ebuild: Version Bump, EAPI bump, drop patch included upstream 25 Jun 2010; Raúl Porcel openmpi-1.4.1.ebuild: Add ~ia64 wrt #324417 17 Jun 2010; Justin Bronder -openmpi-1.2.9.ebuild: sys-cluster/openmpi cleanup 23 May 2010; Pacho Ramos openmpi-1.4.1.ebuild: stable amd64, bug 307627 26 Mar 2010; Raúl Porcel openmpi-1.4.1.ebuild: alpha/sparc stable wrt #307627 24 Mar 2010; Brent Baude openmpi-1.4.1.ebuild: stable ppc, bug 307627 23 Mar 2010; Brent Baude openmpi-1.4.1.ebuild: stable ppc64, bug 307627 22 Mar 2010; Pawel Hajdan jr openmpi-1.4.1.ebuild: x86 stable wrt bug #307627 03 Feb 2010; Justin Bronder openmpi-1.4.1.ebuild, +files/openmpi-1.4.1-r22513.patch: Add upstream fix for wrapper flag ordering 20 Jan 2010; Justin Bronder -openmpi-1.2.9-r1.ebuild, -openmpi-1.3.3.ebuild, -openmpi-1.4.ebuild: cleanup sys-cluster/openmpi *openmpi-1.4.1 (20 Jan 2010) 20 Jan 2010; Justin Bronder +openmpi-1.4.1.ebuild: Bump sys-cluster/openmpi-1.4.1 and workaround bad wrapper include path 06 Jan 2010; Justin Bronder -openmpi-1.2.6-r1.ebuild: cleanup old versions. 10 Dec 2009; Alexis Ballier openmpi-1.4.ebuild: keyword ~x86-fbsd *openmpi-1.4 (09 Dec 2009) 09 Dec 2009; Justin Bronder +openmpi-1.4.ebuild: Bump sys-cluster/openmpi-1.4 18 Aug 2009; Justin Bronder openmpi-1.3.3.ebuild: Remove -I hack for fortran *openmpi-1.2.9-r1 (18 Aug 2009) 18 Aug 2009; Justin Bronder +openmpi-1.2.9-r1.ebuild: Push /usr/include into the default searchpath for mpif90. #281283 17 Aug 2009; Justin Bronder openmpi-1.3.3.ebuild: Add blocker against app-text/lcdf-typetools when vt is enabled. #281318 *openmpi-1.3.3 (13 Aug 2009) 13 Aug 2009; Justin Bronder +openmpi-1.3.3.ebuild: Bump EAPI. Add the vt use flag for VampirTrace. Add blocker against dev-libs/libotf when vt is enabled #265710. 05 Jul 2009; Markus Meier openmpi-1.2.9.ebuild: amd64 stable, bug #266555 13 Jun 2009; Justin Bronder openmpi-1.3.2.ebuild: Replace changed --{with,enable}-progress-threads. #269176 02 May 2009; Raúl Porcel openmpi-1.2.9.ebuild: sparc/x86 stable wrt #266555 22 Apr 2009; Justin Bronder -openmpi-1.3.1.ebuild: cleanup *openmpi-1.3.2 (22 Apr 2009) 22 Apr 2009; Justin Bronder +openmpi-1.3.2.ebuild: bump openmpi-1.3.2 21 Apr 2009; Brent Baude openmpi-1.2.9.ebuild: Marking openmpi-1.2.9 ppc64 for bug 266555 18 Apr 2009; Tobias Klausmann openmpi-1.2.9.ebuild: Stable on alpha, bug #266555 18 Apr 2009; nixnut openmpi-1.2.9.ebuild: ppc stable #266555 17 Apr 2009; Justin Bronder openmpi-1.2.9.ebuild: Use EAPI=1 for default +cxx with openmpi-1.2.9 17 Apr 2009; Justin Bronder -openmpi-1.2.5.ebuild, -openmpi-1.2.6.ebuild, -openmpi-1.2.7.ebuild, -openmpi-1.2.7-r1.ebuild, -openmpi-1.2.8.ebuild, -openmpi-1.3.ebuild: Cleanup old versions. 25 Mar 2009; Justin Bronder openmpi-1.3.1.ebuild: Fix #257086 again. The previous fix was copied incorrectly from the ebuild in the science overlay. *openmpi-1.3.1 (19 Mar 2009) 19 Mar 2009; Justin Bronder +openmpi-1.3.1.ebuild: Bump openmpi-1.3.1 22 Feb 2009; Justin Bronder openmpi-1.3.ebuild: Push Vampir Trace includes to a subdir. #257086 *openmpi-1.2.9 (20 Feb 2009) 20 Feb 2009; Justin Bronder +openmpi-1.2.9.ebuild: Bump sys-cluster/openmpi-1.2.9 29 Jan 2009; Justin Bronder openmpi-1.3.ebuild: Don't build Vampir Trace on sparc, #256529. *openmpi-1.3 (27 Jan 2009) 27 Jan 2009; Justin Bronder +openmpi-1.3.ebuild: Bump sys-cluster/openmpi-1.3. Added cxx as default USE flag and blocker on sys-cluster/mpiexec. 17 Oct 2008; Markus Meier metadata.xml: smp USE-flag is global now *openmpi-1.2.7-r1 (12 Sep 2008) 12 Sep 2008; Justin Bronder metadata.xml, +openmpi-1.2.7-r1.ebuild: Clean up the misleading usage of USE=threads by separating the safe and experimental portions. See #237435. Thanks to kyron (Eric Thibodeau) for the report and patch. 28 Jul 2008; Panagiotis Christopoulos metadata.xml: Update metadata.xml to include USE flag descriptions. Entries taken from profiles/use.local.desc 21 Jul 2008; nixnut openmpi-1.2.6-r1.ebuild: Stable on ppc wrt bug 231251 17 Jul 2008; Markus Rothe openmpi-1.2.6-r1.ebuild: Stable on ppc64; bug #231251 14 Jul 2008; Raúl Porcel openmpi-1.2.6-r1.ebuild: alpha stable wrt #231251 10 Jul 2008; Christian Faulhammer openmpi-1.2.6-r1.ebuild: stable x86, bug 231251 09 Jul 2008; Santiago M. Mola openmpi-1.2.6-r1.ebuild: amd64 stable wrt bug #231251 09 Jul 2008; Ferris McCormick openmpi-1.2.6-r1.ebuild: Sparc stable, Bug #231251 (only change is to force smp on, and all my testing is always with smp). *openmpi-1.2.6-r1 (08 Jul 2008) 08 Jul 2008; Justin Bronder +openmpi-1.2.6-r1.ebuild: Removing the smp USE flag, see #224099 starting at comment 14. 25 Jun 2008; Justin Bronder openmpi-1.2.6.ebuild: Fix the romio use flag so romio can be disabled as it was always built before. Thanks to Coldwind, #224099c16 18 Jun 2008; Ferris McCormick openmpi-1.2.6.ebuild: Sparc stable, bug #224099. 01 Jun 2008; nixnut openmpi-1.2.6.ebuild: Stable on ppc wrt bug 224099 31 May 2008; Christian Faulhammer openmpi-1.2.6.ebuild: stable x86, bug 224099 30 May 2008; Markus Rothe openmpi-1.2.6.ebuild: Stable on ppc64; bug #224099 30 May 2008; Christian Faulhammer openmpi-1.2.6.ebuild: don't execute tests if USE=threads is used *openmpi-1.2.6 (21 Apr 2008) 21 Apr 2008; Justin Bronder +openmpi-1.2.6.ebuild: Openmpi-1.2.6 bump (#218204). Fix src_test(), (#216120 c6). 18 Apr 2008; Justin Bronder openmpi-1.2.5.ebuild: Added ~ppc, #216120 16 Apr 2008; Ferris McCormick openmpi-1.2.5.ebuild: Add ~sparc keyword at developer's request --- Bug #216120, which please see. 07 Apr 2008; Tobias Klausmann openmpi-1.2.5.ebuild: Keyworded on alpha, bug #216120 07 Apr 2008; Markus Rothe openmpi-1.2.5.ebuild: Added ~ppc64; bug #216120 31 Jan 2008; Donnie Berkholz ; -openmpi-1.1.1.ebuild, -openmpi-1.1.2.ebuild, -openmpi-1.2.4.ebuild, -openmpi-1.2.4-r1.ebuild: Clean up. *openmpi-1.2.5 (17 Jan 2008) 17 Jan 2008; Justin Bronder +openmpi-1.2.5.ebuild: Version bump. Remove slurm USE flag as slurm isn't in the tree. Let configure find libtorque via pbs-config. 13 Dec 2007; Justin Bronder openmpi-1.2.4.ebuild: Minor fixes to sys-cluster/openmpi-1.2.4, thanks to dberkholz for pointing them out. *openmpi-1.2.4 (13 Dec 2007) 13 Dec 2007; Justin Bronder +openmpi-1.2.4.ebuild: Bump sys-cluster/openmpi-1.2.4 (Bug #166787). Change virtual/pbs to sys-cluster/torque. Add use flags nocxx romio slurm heterogeneous smp and ipv6. Disable xgrid support (OS X). Include /usr/include by default with gfortran and mpif77. 26 Apr 2007; Donnie Berkholz ; metadata.xml: Update for cluster herd split to hp-cluster and ha-cluster. 06 Jan 2007; Donnie Berkholz ; openmpi-1.1.2.ebuild: Fix miscalled use_enable(). This would result in Fortran not being enabled as expected (Aaron Tygart). 06 Dec 2006; Donnie Berkholz ; openmpi-1.1.1.ebuild, openmpi-1.1.2.ebuild: Stop PROVIDEing mpi virtual, we're on a new-style virtual now. 06 Dec 2006; Donnie Berkholz ; openmpi-1.1.1.ebuild, openmpi-1.1.2.ebuild: Can't do that with new-style virtuals, block on other providers instead. 06 Dec 2006; Donnie Berkholz ; openmpi-1.1.1.ebuild, openmpi-1.1.2.ebuild: Block virtual/mpi (Aaron Tygart). 06 Dec 2006; Donnie Berkholz ; openmpi-1.1.1.ebuild, openmpi-1.1.2.ebuild: Explicitly set DEPEND to RDEPEND. *openmpi-1.1.2 (23 Nov 2006) 23 Nov 2006; Donnie Berkholz ; +openmpi-1.1.2.ebuild: (#153968) Bump. Interesting changes include correctness and performance fixes for heterogenous nodes as well as TCP updates to support non-uniform TCP environments. More info at http://www.open-mpi.org/community/lists/announce/2006/10/0008.php. 25 Sep 2006; Donnie Berkholz ; openmpi-1.1.1.ebuild: Add MPI to the description, drop some capital letters. *openmpi-1.1.1 (25 Sep 2006) 25 Sep 2006; Donnie Berkholz ; +metadata.xml, +openmpi-1.1.1.ebuild: (#126295) Add Open MPI ebuild from the science overlay (Sebastien Fabbro, Eric Thibodeau). I removed the compiler-based slotting mechanism because portage lacks support for multiple slots of the same version -- the SLOT file in /var/db/pkg just gets overwritten and it loses track of the others, amongst other issues. Removed USE=static, that's used to compile static binaries, not to also build static libraries. Changed SLOT to 0 from 6 in the overlay. Removed the hack for PGI compilers, that needs to happen in fortran.eclass. Use epause() from eutils.eclass rather than sleep.