proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

4 files changed, 57 insertions, 0 deletions

diff --git a/sci-biology/newick-utils/Manifest b/sci-biology/newick-utils/Manifest
new file mode 100644
index 000000000000..fa2d5255b412
--- /dev/null
+++ b/sci-biology/newick-utils/Manifest
@@ -0,0 +1,2 @@
+DIST newick-utils-1.3.0.tar.gz 6872730 SHA256 2c4d364a6b74d484b795681a08f648e1c89c373e6aa29c2b84bf690530bc54ee
+DIST newick-utils-1.5.0.tar.gz 7400423 SHA256 b5508ff31228c8d9fc9fb2e9b70aa24192248998c4e315dd82135323c05e1f67
diff --git a/sci-biology/newick-utils/metadata.xml b/sci-biology/newick-utils/metadata.xml
new file mode 100644
index 000000000000..f17a827e3101
--- /dev/null
+++ b/sci-biology/newick-utils/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/newick-utils/newick-utils-1.3.0.ebuild b/sci-biology/newick-utils/newick-utils-1.3.0.ebuild
new file mode 100644
index 000000000000..94c51c218310
--- /dev/null
+++ b/sci-biology/newick-utils/newick-utils-1.3.0.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI="2"
+
+DESCRIPTION="Tools for processing phylogenetic trees (re-root, subtrees, trimming, pruning, condensing, drawing)"
+HOMEPAGE="http://cegg.unige.ch/newick_utils"
+SRC_URI="http://cegg.unige.ch/pub/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+IUSE=""
+KEYWORDS="amd64 x86"
+
+DEPEND=""
+RDEPEND="!dev-games/libnw"
+
+src_install() {
+	einstall || die
+}
+
+src_test() {
+	emake -C tests check-TESTS || die
+}
diff --git a/sci-biology/newick-utils/newick-utils-1.5.0.ebuild b/sci-biology/newick-utils/newick-utils-1.5.0.ebuild
new file mode 100644
index 000000000000..6bf8d108ca81
--- /dev/null
+++ b/sci-biology/newick-utils/newick-utils-1.5.0.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI="2"
+
+DESCRIPTION="Tools for processing phylogenetic trees (re-root, subtrees, trimming, pruning, condensing, drawing)"
+HOMEPAGE="http://cegg.unige.ch/newick_utils"
+SRC_URI="http://cegg.unige.ch/pub/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND="!dev-games/libnw"
+
+src_install() {
+	einstall || die
+}
+
+src_test() {
+	emake -C tests check-TESTS || die
+}