diff options
| -rw-r--r-- | metadata/md5-cache/dev-cpp/gccxml-0.9.0_pre20120309 | 12 | ||||
| -rw-r--r-- | metadata/md5-cache/dev-libs/boost-1.62.0-r1 | 2 | ||||
| -rw-r--r-- | metadata/md5-cache/dev-libs/boost-1.63.0 | 2 | ||||
| -rw-r--r-- | metadata/md5-cache/net-libs/liboping-1.8.0-r1 | 2 | ||||
| -rw-r--r-- | metadata/md5-cache/net-libs/liboping-1.9.0 | 2 | ||||
| -rw-r--r-- | metadata/md5-cache/sci-biology/mummer-3.9.4_alpha | 15 | ||||
| -rw-r--r-- | metadata/pkg_desc_index | 4 | ||||
| -rw-r--r-- | metadata/timestamp.chk | 2 |
8 files changed, 22 insertions, 19 deletions
diff --git a/metadata/md5-cache/dev-cpp/gccxml-0.9.0_pre20120309 b/metadata/md5-cache/dev-cpp/gccxml-0.9.0_pre20120309 deleted file mode 100644 index 724754be78fd..000000000000 --- a/metadata/md5-cache/dev-cpp/gccxml-0.9.0_pre20120309 +++ /dev/null @@ -1,12 +0,0 @@ -DEFINED_PHASES=compile configure install prepare test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 -DESCRIPTION=XML output extension to GCC -EAPI=4 -HOMEPAGE=http://www.gccxml.org/ -KEYWORDS=amd64 ~arm ~mips ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos -LICENSE=BSD -SLOT=0 -SRC_URI=mirror://gentoo/gccxml-0.9.0_pre20120309.tar.xz -_eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils fa4d8052a1ccf4fbbfa76361bffebe42 eutils 017377e73405d964cd0137088cddb9c3 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 66b3bf714f8cfc1b6494db5269b4666e toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c -_md5_=f58c1a9d2391d6e02dc457c14912e100 diff --git a/metadata/md5-cache/dev-libs/boost-1.62.0-r1 b/metadata/md5-cache/dev-libs/boost-1.62.0-r1 index 98b8d4a64489..e021a265a759 100644 --- a/metadata/md5-cache/dev-libs/boost-1.62.0-r1 +++ b/metadata/md5-cache/dev-libs/boost-1.62.0-r1 @@ -13,4 +13,4 @@ SLOT=0/1.62.0 SRC_URI=https://downloads.sourceforge.net/project/boost/boost/1.62.0/boost_1_62_0.tar.bz2 _eclass_exported_funcs=pkg_preinst:- pkg_setup:- src_prepare:- src_configure:- src_compile:multilib-minimal src_test:multilib-minimal src_install:multilib-minimal _eclasses_=eutils 017377e73405d964cd0137088cddb9c3 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multilib-build 8fe2e81aeb36cdf8a6cc5f50443879cc multilib-minimal 0224dee31c0f98405d572e14ad6dee65 multiprocessing 66b3bf714f8cfc1b6494db5269b4666e python-r1 dcd61d7a5c283f18cfe763552b09eb88 python-utils-r1 d142329ab093dd20c1dd0edb5f094108 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c -_md5_=6a61a9a98f2fcd87311f77d4f221ac3a +_md5_=d57be904ea0ec1fae7913477b3060da8 diff --git a/metadata/md5-cache/dev-libs/boost-1.63.0 b/metadata/md5-cache/dev-libs/boost-1.63.0 index 3389fc8d5fe1..1fbef9b9f2bd 100644 --- a/metadata/md5-cache/dev-libs/boost-1.63.0 +++ b/metadata/md5-cache/dev-libs/boost-1.63.0 @@ -13,4 +13,4 @@ SLOT=0/1.63.0 SRC_URI=https://downloads.sourceforge.net/project/boost/boost/1.63.0/boost_1_63_0.tar.bz2 _eclass_exported_funcs=pkg_preinst:- pkg_setup:- src_prepare:- src_configure:- src_compile:multilib-minimal src_test:multilib-minimal src_install:multilib-minimal _eclasses_=eutils 017377e73405d964cd0137088cddb9c3 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multilib-build 8fe2e81aeb36cdf8a6cc5f50443879cc multilib-minimal 0224dee31c0f98405d572e14ad6dee65 multiprocessing 66b3bf714f8cfc1b6494db5269b4666e python-r1 dcd61d7a5c283f18cfe763552b09eb88 python-utils-r1 d142329ab093dd20c1dd0edb5f094108 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c -_md5_=0e39335e19055d500ace72e0d2c344eb +_md5_=2df5c128e07b7830618d9d6d491ea42f diff --git a/metadata/md5-cache/net-libs/liboping-1.8.0-r1 b/metadata/md5-cache/net-libs/liboping-1.8.0-r1 index 22d696dc8e51..61042fc37f0f 100644 --- a/metadata/md5-cache/net-libs/liboping-1.8.0-r1 +++ b/metadata/md5-cache/net-libs/liboping-1.8.0-r1 @@ -11,4 +11,4 @@ SLOT=0/0.2 SRC_URI=https://noping.cc/files/liboping-1.8.0.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:perl-module src_test:- src_install:- _eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c fcaps 6a1091a98b1dde01cc26ab3252da1a9b libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 66b3bf714f8cfc1b6494db5269b4666e perl-functions aac50de73be0a80ebe780e0b20850130 perl-module f6549146ea31a902e20b5f2e6f244358 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 -_md5_=eda6ec535ca05d35ce4603ae4724ae49 +_md5_=8e56c863006ad6104d5f0e8fcecdbd84 diff --git a/metadata/md5-cache/net-libs/liboping-1.9.0 b/metadata/md5-cache/net-libs/liboping-1.9.0 index e012443891eb..7c6523f0ceca 100644 --- a/metadata/md5-cache/net-libs/liboping-1.9.0 +++ b/metadata/md5-cache/net-libs/liboping-1.9.0 @@ -11,4 +11,4 @@ SLOT=0/0.2 SRC_URI=https://noping.cc/files/liboping-1.9.0.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:perl-module src_test:- src_install:- _eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c fcaps 6a1091a98b1dde01cc26ab3252da1a9b libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 66b3bf714f8cfc1b6494db5269b4666e perl-functions aac50de73be0a80ebe780e0b20850130 perl-module f6549146ea31a902e20b5f2e6f244358 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 -_md5_=eda6ec535ca05d35ce4603ae4724ae49 +_md5_=8e56c863006ad6104d5f0e8fcecdbd84 diff --git a/metadata/md5-cache/sci-biology/mummer-3.9.4_alpha b/metadata/md5-cache/sci-biology/mummer-3.9.4_alpha new file mode 100644 index 000000000000..4a76fc20e1bd --- /dev/null +++ b/metadata/md5-cache/sci-biology/mummer-3.9.4_alpha @@ -0,0 +1,15 @@ +DEFINED_PHASES=compile configure install pretend setup +DEPEND=python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] dev-lang/swig:0 ) +DESCRIPTION=A rapid whole genome aligner +EAPI=6 +HOMEPAGE=http://mummer.sourceforge.net/ +IUSE=openmp perl python python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 +KEYWORDS=~amd64 ~x86 +LICENSE=Artistic +RDEPEND=app-shells/tcsh dev-lang/perl:= python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] ) +REQUIRED_USE=python? ( || ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) ) +SLOT=0 +SRC_URI=https://github.com/gmarcais/mummer/releases/download/v3.9.4alpha/mummer-3.9.4alpha.tar.gz -> mummer-3.9.4_alpha.tar.gz +_eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_configure:- src_compile:- src_install:- +_eclasses_=multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 perl-functions aac50de73be0a80ebe780e0b20850130 python-r1 dcd61d7a5c283f18cfe763552b09eb88 python-utils-r1 d142329ab093dd20c1dd0edb5f094108 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 +_md5_=f9f59e9f624628103b59f154925fd5fd diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index index 616dd4895840..cd05d44e56c7 100644 --- a/metadata/pkg_desc_index +++ b/metadata/pkg_desc_index @@ -2824,7 +2824,7 @@ dev-cpp/commoncpp2 1.8.1-r1 1.8.1-r2: C++ library offering portable support for dev-cpp/cpp-hocon 0.1.4: Provides C++ support for the HOCON configuration file format dev-cpp/ctemplate 2.2_p129 2.3: A simple but powerful template language for C++ dev-cpp/eigen 2.0.17 3.2.8-r2 3.2.9 3.2.10 3.3.1: C++ template library for linear algebra -dev-cpp/gccxml 0.9.0_pre20120309 0.9.0_pre20131217: XML output extension to GCC +dev-cpp/gccxml 0.9.0_pre20131217: XML output extension to GCC dev-cpp/gconfmm 2.28.3 2.28.3-r1: C++ bindings for GConf dev-cpp/gflags 2.1.1-r1 2.1.2 9999: Google's C++ argument parsing library dev-cpp/glibmm 2.44.0 2.46.4 2.48.1 2.50.0: C++ interface for glib2 @@ -15819,7 +15819,7 @@ sci-biology/mira 4.0.2: Whole Genome Shotgun and EST Sequence Assembler for Sang sci-biology/mosaik 1.0.1367 1.0.1388 2.2.30: A reference-guided aligner for next-generation sequencing technologies sci-biology/mothur 1.27.0-r1: A suite of algorithms for ecological bioinformatics sci-biology/mrbayes 3.1.2-r1 3.1.2-r2: Bayesian Inference of Phylogeny -sci-biology/mummer 3.20 3.21 3.22-r1: A rapid whole genome aligner +sci-biology/mummer 3.9.4_alpha 3.20 3.21 3.22-r1: A rapid whole genome aligner sci-biology/muscle 3.8.31: Multiple sequence comparison by log-expectation sci-biology/ncbi-tools 2.2.26-r2: Development toolkit and applications for computational biology, including NCBI BLAST sci-biology/newick-utils 1.3.0 1.5.0 1.6: Tools for processing phylogenetic trees diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk index 06147bbf2484..35a5b826f124 100644 --- a/metadata/timestamp.chk +++ b/metadata/timestamp.chk @@ -1 +1 @@ -Sun, 15 Jan 2017 16:02:31 +0000 +Sun, 15 Jan 2017 16:42:52 +0000 |