diff options
Diffstat (limited to 'sci-biology/t-coffee/t-coffee-11.00-r1.ebuild')
| -rw-r--r-- | sci-biology/t-coffee/t-coffee-11.00-r1.ebuild | 56 |
1 files changed, 0 insertions, 56 deletions
diff --git a/sci-biology/t-coffee/t-coffee-11.00-r1.ebuild b/sci-biology/t-coffee/t-coffee-11.00-r1.ebuild deleted file mode 100644 index 919287c790f8..000000000000 --- a/sci-biology/t-coffee/t-coffee-11.00-r1.ebuild +++ /dev/null @@ -1,56 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils flag-o-matic toolchain-funcs - -MY_HASH="8cbe486" -MY_PV="${PV}.${MY_HASH}" -MY_P="T-COFFEE_distribution_Version_${MY_PV}" - -DESCRIPTION="A multiple sequence alignment package" -HOMEPAGE="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html" -SRC_URI="http://www.tcoffee.org/Packages/Stable/Version_${MY_PV}/${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -RDEPEND=" - sci-biology/clustalw - sci-chemistry/tm-align" -DEPEND="" - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - sed \ - -e '/@/s:.*;:\t:g' \ - -e '/Linking/s:$(CC):$(CC) $(CFLAGS) $(LDFLAGS):g' \ - -i t_coffee_source/makefile || die - epatch \ - "${FILESDIR}"/${P}-mayhem.patch \ - "${FILESDIR}"/${P}-set_proper_dir_permissions.patch -} - -src_compile() { - [[ $(gcc-version) == "3.4" ]] || \ - [[ $(gcc-version) == "4.1" ]] && \ - append-flags -fno-unit-at-a-time - emake \ - V=1 \ - CC="$(tc-getCXX)" \ - CFLAGS="${CXXFLAGS} -Wno-write-strings -Wno-unused-result" \ - -C t_coffee_source t_coffee -} - -src_install() { - dobin t_coffee_source/t_coffee - - if use examples; then - insinto /usr/share/${PN} - doins -r example - fi -} |