diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2014-03-06 11:25:34 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2014-03-06 11:25:34 +0000 |
| commit | 1e332241004071e99ee7c712bdd16e472baa7da1 (patch) | |
| tree | 72dec5fd29e7321882602e598c846056c3173d11 /sci-biology | |
| parent | Stable for amd64 wrt bug #495370 (diff) | |
| download | gentoo-2-1e332241004071e99ee7c712bdd16e472baa7da1.tar.gz gentoo-2-1e332241004071e99ee7c712bdd16e472baa7da1.tar.bz2 gentoo-2-1e332241004071e99ee7c712bdd16e472baa7da1.zip | |
sci-biology/rebase: Version Bump
(Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1403.ebuild | 46 |
2 files changed, 53 insertions, 2 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 8ba31e7ad297..6f8be6b54942 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.119 2013/12/01 17:02:19 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.120 2014/03/06 11:25:34 jlec Exp $ + +*rebase-1403 (06 Mar 2014) + + 06 Mar 2014; Justin Lecher <jlec@gentoo.org> +rebase-1403.ebuild: + Version Bump *rebase-1312 (01 Dec 2013) diff --git a/sci-biology/rebase/rebase-1403.ebuild b/sci-biology/rebase/rebase-1403.ebuild new file mode 100644 index 000000000000..8431770b1bc0 --- /dev/null +++ b/sci-biology/rebase/rebase-1403.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1403.ebuild,v 1.1 2014/03/06 11:25:34 jlec Exp $ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |