New version. Added 2.50 to x86. Removed old version.

(Portage version: 2.0.51.22-r2)

6 files changed, 21 insertions, 22 deletions

diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog
index 87a019227c4f..f8ae9a1d2fa6 100644
--- a/sci-biology/t-coffee/ChangeLog
+++ b/sci-biology/t-coffee/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/t-coffee
 # Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.3 2005/05/12 00:22:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.4 2005/08/07 14:55:45 ribosome Exp $
+
+*t-coffee-2.66 (07 Aug 2005)
+
+  07 Aug 2005; Olivier Fisette <ribosome@gentoo.org> -t-coffee-2.26.ebuild,
+  t-coffee-2.50.ebuild, +t-coffee-2.66.ebuild:
+  New version. Added 2.50 to x86. Removed old version.
 
 *t-coffee-2.50 (12 May 2005)
 
diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest
index 6d5c394746f1..b26920e8ab34 100644
--- a/sci-biology/t-coffee/Manifest
+++ b/sci-biology/t-coffee/Manifest
@@ -1,6 +1,8 @@
 MD5 d4da4cbcd47b44a04dbbb998dc8bb5c0 t-coffee-2.26.ebuild 1351
-MD5 5d84de128df7c5840b981563f05eda4d t-coffee-2.50.ebuild 1290
+MD5 ac08b803d77834a4d55413da36e1270c t-coffee-2.50.ebuild 1289
+MD5 625339aaf56d78a8ad4738957fe35fab t-coffee-2.66.ebuild 1141
 MD5 0142702b8ba8283517956a9ee0f90ade ChangeLog 832
 MD5 0bbfd32ca9864625c55ab6460dbbd963 metadata.xml 755
 MD5 746d3921012d17495ab81da3878a076d files/digest-t-coffee-2.26 86
 MD5 fa17e53f0288a9e7046c7a15bfe12cb7 files/digest-t-coffee-2.50 87
+MD5 ed78ff61d489ff54debcffde53dca64e files/digest-t-coffee-2.66 87
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.26 b/sci-biology/t-coffee/files/digest-t-coffee-2.26
deleted file mode 100644
index 84315b952543..000000000000
--- a/sci-biology/t-coffee/files/digest-t-coffee-2.26
+++ /dev/null
@@ -1 +0,0 @@
-MD5 7e345f8410d921075492dd9853331e44 T-COFFEE_distribution_Version_2.26.tar.gz 901469
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.66 b/sci-biology/t-coffee/files/digest-t-coffee-2.66
new file mode 100644
index 000000000000..ba174557b6a3
--- /dev/null
+++ b/sci-biology/t-coffee/files/digest-t-coffee-2.66
@@ -0,0 +1 @@
+MD5 ed49db50f3b618b77d719c111f21d915 T-COFFEE_distribution_Version_2.66.tar.gz 1509938
diff --git a/sci-biology/t-coffee/t-coffee-2.50.ebuild b/sci-biology/t-coffee/t-coffee-2.50.ebuild
index a222cbd86d37..e8632faa0ca3 100644
--- a/sci-biology/t-coffee/t-coffee-2.50.ebuild
+++ b/sci-biology/t-coffee/t-coffee-2.50.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.50.ebuild,v 1.1 2005/05/12 00:22:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.50.ebuild,v 1.2 2005/08/07 14:55:45 ribosome Exp $
 
 inherit toolchain-funcs
 
@@ -13,7 +13,7 @@ RESTRICT="nomirror"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="~x86"
+KEYWORDS="x86"
 
 DEPEND="sci-biology/clustalw"
 
diff --git a/sci-biology/t-coffee/t-coffee-2.26.ebuild b/sci-biology/t-coffee/t-coffee-2.66.ebuild
index 1f62689e5811..8d3c6e0b0f50 100644
--- a/sci-biology/t-coffee/t-coffee-2.26.ebuild
+++ b/sci-biology/t-coffee/t-coffee-2.66.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.26.ebuild,v 1.2 2005/05/12 00:22:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.66.ebuild,v 1.1 2005/08/07 14:55:45 ribosome Exp $
 
 inherit toolchain-funcs
 
@@ -13,7 +13,7 @@ RESTRICT="nomirror"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="x86"
+KEYWORDS="~x86"
 
 DEPEND="sci-biology/clustalw"
 
@@ -23,10 +23,7 @@ S=${TCDIR}/t_coffee_source
 src_unpack(){
 	unpack ${A}
 	cd ${S}
-	sed -i -e "s/CC	= cc/CC	= $(tc-getCC) ${CFLAGS}/" makefile || die || die
-	cd ${TCDIR}/bin
-	sed -i -e 's%chdir "./example/test";%chdir "../example/test";%' test.pl || die
-
+	sed -e "s/CC	= cc/CC	= $(tc-getCC) ${CFLAGS}/" -i makefile || die
 }
 
 src_compile() {
@@ -36,20 +33,14 @@ src_compile() {
 src_install() {
 	cd ${TCDIR}/bin
 	dobin t_coffee
-	insinto /usr/share/${PN}/lib
-	doins ${TCDIR}/html
+	insinto /usr/share/${PN}/lib/html
+	doins ${TCDIR}/html/*
 
 	dodoc ${TCDIR}/doc/README4T-COFFEE
 	insinto /usr/share/doc/${PF}
 	doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf}
+	doins ${TCDIR}/doc/*.txt
 
-	insinto /usr/share/${PN}/example/seq
-	doins ${TCDIR}/example/seq/*
-	insinto /usr/share/${PN}/example/test
-	doins ${TCDIR}/example/test/*.{aln,pep}
-}
-
-src_test() {
-	cd ${TCDIR}/bin
-	./test.pl || die
+	insinto /usr/share/${PN}/example
+	doins ${TCDIR}/example/*
 }