New package, ebuild written by me

(Portage version: 2.2_rc30/cvs/Linux x86_64)

3 files changed, 57 insertions, 0 deletions

diff --git a/sci-biology/mira/ChangeLog b/sci-biology/mira/ChangeLog
new file mode 100644
index 000000000000..445b304ddf32
--- /dev/null
+++ b/sci-biology/mira/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/mira
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v 1.1 2010/02/03 03:06:22 weaver Exp $
+
+*mira-3.0.0 (02 Feb 2010)
+
+  02 Feb 2010; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml,
+  +mira-3.0.0.ebuild:
+  New package, ebuild written by me
+
diff --git a/sci-biology/mira/metadata.xml b/sci-biology/mira/metadata.xml
new file mode 100644
index 000000000000..3302123e5718
--- /dev/null
+++ b/sci-biology/mira/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer>
+		<email>weaver@gentoo.org</email>
+		<name>Andrey Kislyuk</name>
+	</maintainer>
+	<herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/mira/mira-3.0.0.ebuild b/sci-biology/mira/mira-3.0.0.ebuild
new file mode 100644
index 000000000000..3543b9d68d38
--- /dev/null
+++ b/sci-biology/mira/mira-3.0.0.ebuild
@@ -0,0 +1,38 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.1 2010/02/03 03:06:22 weaver Exp $
+
+EAPI="2"
+
+inherit base
+
+DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina"
+HOMEPAGE="http://www.chevreux.org/projects_mira.html"
+SRC_URI="mirror://sourceforge/mira-assembler/${P}.tar.bz2"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE="doc"
+KEYWORDS="~amd64 ~x86"
+
+CDEPEND=">=dev-libs/boost-1.35.0"
+DEPEND="${CDEPEND}
+	dev-libs/expat
+	doc? ( >=app-text/texlive-core-2009 )"
+RDEPEND="${CDEPEND}"
+
+src_prepare() {
+	find -name configure -or -name 'Makefile*' | xargs sed -i 's/flex++/flex -+/' || die
+}
+
+src_compile() {
+	base_src_compile
+	if use doc; then emake -C doc clean docs || die; fi
+}
+
+src_install() {
+	einstall || die
+	dodoc AUTHORS GETTING_STARTED NEWS README* HELP_WANTED THANKS INSTALL
+	find doc/docs/man -type f | xargs doman
+	find doc/docs/texinfo -type f | xargs doinfo
+}