New ebuild

(Portage version: 2.2_rc62/cvs/Linux x86_64)

4 files changed, 285 insertions, 0 deletions

diff --git a/sci-chemistry/azara/ChangeLog b/sci-chemistry/azara/ChangeLog
new file mode 100644
index 000000000000..07c003fc51c5
--- /dev/null
+++ b/sci-chemistry/azara/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/azara
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/azara/ChangeLog,v 1.1 2010/02/07 19:51:02 jlec Exp $
+
+*azara-2.7 (07 Feb 2010)
+
+  07 Feb 2010; Justin Lecher (jlec) <jlec@gentoo.org> +azara-2.7.ebuild,
+  +files/help-makefile.patch, +metadata.xml:
+  New Ebuild
+
diff --git a/sci-chemistry/azara/azara-2.7.ebuild b/sci-chemistry/azara/azara-2.7.ebuild
new file mode 100644
index 000000000000..ccbba37a70ab
--- /dev/null
+++ b/sci-chemistry/azara/azara-2.7.ebuild
@@ -0,0 +1,69 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/azara/azara-2.7.ebuild,v 1.1 2010/02/07 19:51:02 jlec Exp $
+
+EAPI="3"
+
+inherit eutils toolchain-funcs
+
+DESCRIPTION="A suite of programmes to process and view NMR data"
+HOMEPAGE="http://www.bio.cam.ac.uk/azara/"
+SRC_URI="http://www.bio.cam.ac.uk/ccpn/download/${PN}/${P}-src.tar.gz"
+
+LICENSE="AZARA"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="opengl X xpm"
+
+RDEPEND="
+	xpm? ( x11-libs/libXpm )
+	X? ( x11-libs/libX11 )"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+	echo "" > ENVIRONMENT
+
+	epatch "${FILESDIR}"/help-makefile.patch
+}
+
+src_compile() {
+	local mymake
+	local xpmuse
+
+	mymake="${mymake} help nongui"
+	use X && mymake="${mymake} gui"
+	use opengl && mymake="${mymake} gl"
+	use xpm && XPMUSE="XPM_FLAG=-DUSE_XPM XPM_LIB=-lXpm"
+
+	emake -j1 CC=$(tc-getCC) \
+		CFLAGS="${CFLAGS}" \
+		LFLAGS="${LDFLAGS}" \
+		MATH_LIB="-lm" \
+		X11_INCLUDE_DIR="-I${EPREFIX}/usr/X11R6/include" \
+		MOTIF_INCLUDE_DIR="-I${EPREFIX}/usr/include" \
+		X11_LIB_DIR="-L${EPREFIX}/usr/$(get_libdir)" \
+		MOTIF_LIB_DIR="-L${EPREFIX}/usr/$(get_libdir)" \
+		${XPMUSE} \
+		X11_LIB="-lX11" \
+		MOTIF_LIB="-lXm -lXt" \
+		GL_INCLUDE_DIR="-I${EPREFIX}/usr/X11R6/include -I${EPREFIX}/usr/include" \
+		GL_LIB_DIR="-I${EPREFIX}/usr/$(get_libdir)" \
+		GL_LIB="-lglut -lGLU -lGL -lXmu -lX11 -lXext" \
+		ENDIAN_FLAG="-DLITTLE_ENDIAN_DATA" \
+		${mymake} || die
+}
+
+src_install() {
+	for bin in bin/*; do
+		dobin "${bin}" || die "failed to install ${bin}"
+	done
+
+	mv "${D}"/usr/bin/{,azara-}extract || die "failed to fix extract collision"
+
+	dodoc CHANGES* README* || die
+	dohtml -r html/* || die
+}
+
+pkg_postinst() {
+	einfo "Due to collision we moved the extract binary to azara-extract"
+}
diff --git a/sci-chemistry/azara/files/help-makefile.patch b/sci-chemistry/azara/files/help-makefile.patch
new file mode 100644
index 000000000000..5a42034734da
--- /dev/null
+++ b/sci-chemistry/azara/files/help-makefile.patch
@@ -0,0 +1,196 @@
+--- help/makefile	2002-11-01 13:27:27.000000000 +0100
++++ help/makefile.new	2008-12-24 14:45:56.141225333 +0100
+@@ -37,102 +37,102 @@
+ .c.o:;  $(CC) -c $(CFLAGS) $<
+ 
+ hlp:
+-	txt2hlp azara
+-	txt2hlp combine
+-	txt2hlp components
+-	txt2hlp connect
+-	txt2hlp contours
+-	txt2hlp deflate
+-	txt2hlp extract
+-	txt2hlp peak_find
+-	txt2hlp peak_fit
+-	txt2hlp plot1
+-	txt2hlp plot2
+-	txt2hlp process
+-	txt2hlp project
+-	txt2hlp slides
+-	txt2hlp reflate
+-	txt2hlp unblock
+-	txt2hlp viewer
+-	txt2hlp plot2/baseline
+-	txt2hlp plot2/data
+-	txt2hlp plot2/extract
+-	txt2hlp plot2/levels
+-	txt2hlp plot2/object
+-	txt2hlp plot2/output
+-	txt2hlp plot2/peak
+-	txt2hlp plot2/peaks
+-	txt2hlp plot2/phase
+-	txt2hlp plot2/property
+-	txt2hlp plot2/region
+-	txt2hlp plot2/rowcol
+-	txt2hlp plot2/save
+-	txt2hlp plot2/tracking
+-	txt2hlp plot1/button
+-	txt2hlp plot1/data
+-	txt2hlp plot1/object
+-	txt2hlp plot1/output
+-	txt2hlp plot1/property
+-	txt2hlp plot1/region
+-	txt2hlp plot1/slider
+-	txt2hlp plot1/text
++	./txt2hlp azara
++	./txt2hlp combine
++	./txt2hlp components
++	./txt2hlp connect
++	./txt2hlp contours
++	./txt2hlp deflate
++	./txt2hlp extract
++	./txt2hlp peak_find
++	./txt2hlp peak_fit
++	./txt2hlp plot1
++	./txt2hlp plot2
++	./txt2hlp process
++	./txt2hlp project
++	./txt2hlp slides
++	./txt2hlp reflate
++	./txt2hlp unblock
++	./txt2hlp viewer
++	./txt2hlp plot2/baseline
++	./txt2hlp plot2/data
++	./txt2hlp plot2/extract
++	./txt2hlp plot2/levels
++	./txt2hlp plot2/object
++	./txt2hlp plot2/output
++	./txt2hlp plot2/peak
++	./txt2hlp plot2/peaks
++	./txt2hlp plot2/phase
++	./txt2hlp plot2/property
++	./txt2hlp plot2/region
++	./txt2hlp plot2/rowcol
++	./txt2hlp plot2/save
++	./txt2hlp plot2/tracking
++	./txt2hlp plot1/button
++	./txt2hlp plot1/data
++	./txt2hlp plot1/object
++	./txt2hlp plot1/output
++	./txt2hlp plot1/property
++	./txt2hlp plot1/region
++	./txt2hlp plot1/slider
++	./txt2hlp plot1/text
+ 
+ html:
+-	txt2html azara
+-	txt2html combine
+-	txt2html components
+-	txt2html connect
+-	txt2html contours
+-	txt2html deflate
+-	txt2html extract
+-	txt2html peak_find
+-	txt2html peak_fit
+-	txt2html plot1
+-	txt2html plot2
+-	txt2html process
+-	txt2html project
+-	txt2html slides
+-	txt2html reflate
+-	txt2html unblock
+-	txt2html viewer
+-	txt2html plot2/baseline
+-	txt2html plot2/data
+-	txt2html plot2/extract
+-	txt2html plot2/levels
+-	txt2html plot2/object
+-	txt2html plot2/output
+-	txt2html plot2/peak
+-	txt2html plot2/peaks
+-	txt2html plot2/phase
+-	txt2html plot2/property
+-	txt2html plot2/region
+-	txt2html plot2/rowcol
+-	txt2html plot2/save
+-	txt2html plot2/tracking
+-	txt2html plot1/button
+-	txt2html plot1/data
+-	txt2html plot1/object
+-	txt2html plot1/output
+-	txt2html plot1/property
+-	txt2html plot1/region
+-	txt2html plot1/slider
+-	txt2html plot1/text
+-	txt2html CHANGES
+-	txt2html INSTALL
+-	txt2html README-2.7
+-	txt2html CHANGES-1.0-1
+-	txt2html CHANGES-1.0-2
+-	txt2html CHANGES-1.0-3
+-	txt2html CHANGES-2.0-0
+-	txt2html CHANGES-2.5-0
+-	txt2html CHANGES-2.6-0
+-	txt2html CHANGES-2.7-0
+-	txt2html LICENSE
++	./txt2html azara
++	./txt2html combine
++	./txt2html components
++	./txt2html connect
++	./txt2html contours
++	./txt2html deflate
++	./txt2html extract
++	./txt2html peak_find
++	./txt2html peak_fit
++	./txt2html plot1
++	./txt2html plot2
++	./txt2html process
++	./txt2html project
++	./txt2html slides
++	./txt2html reflate
++	./txt2html unblock
++	./txt2html viewer
++	./txt2html plot2/baseline
++	./txt2html plot2/data
++	./txt2html plot2/extract
++	./txt2html plot2/levels
++	./txt2html plot2/object
++	./txt2html plot2/output
++	./txt2html plot2/peak
++	./txt2html plot2/peaks
++	./txt2html plot2/phase
++	./txt2html plot2/property
++	./txt2html plot2/region
++	./txt2html plot2/rowcol
++	./txt2html plot2/save
++	./txt2html plot2/tracking
++	./txt2html plot1/button
++	./txt2html plot1/data
++	./txt2html plot1/object
++	./txt2html plot1/output
++	./txt2html plot1/property
++	./txt2html plot1/region
++	./txt2html plot1/slider
++	./txt2html plot1/text
++	./txt2html CHANGES
++	./txt2html INSTALL
++	./txt2html README-2.7
++	./txt2html CHANGES-1.0-1
++	./txt2html CHANGES-1.0-2
++	./txt2html CHANGES-1.0-3
++	./txt2html CHANGES-2.0-0
++	./txt2html CHANGES-2.5-0
++	./txt2html CHANGES-2.6-0
++	./txt2html CHANGES-2.7-0
++	./txt2html LICENSE
+ 
+ clean:
+ 	rm *.o
+ 
+ realclean:
+ 	rm *.o
+-	rm txt2hlp
+-	rm txt2html
++	rm ./txt2hlp
++	rm ./txt2html
diff --git a/sci-chemistry/azara/metadata.xml b/sci-chemistry/azara/metadata.xml
new file mode 100644
index 000000000000..4aaae064be71
--- /dev/null
+++ b/sci-chemistry/azara/metadata.xml
@@ -0,0 +1,10 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<herd>sci-chemistry</herd>
+	<maintainer>
+		<email>jlec@gentoo.org</email>
+		<name>Justin Lecher (jlec)</name>
+	</maintainer>
+</pkgmetadata>
+