Removed old. Do not install built examples

(Portage version: 2.2.0_alpha144/cvs/Linux x86_64, signed Manifest commit with key 0x13CB1360)

9 files changed, 15 insertions, 1104 deletions

diff --git a/sci-libs/superlu/ChangeLog b/sci-libs/superlu/ChangeLog
index a49b6fc45633..1af549cf5bd3 100644
--- a/sci-libs/superlu/ChangeLog
+++ b/sci-libs/superlu/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-libs/superlu
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/ChangeLog,v 1.17 2012/10/16 19:34:38 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/ChangeLog,v 1.18 2012/12/11 18:29:59 bicatali Exp $
+
+  11 Dec 2012; Sébastien Fabbro <bicatali@gentoo.org> -files/4.0-test.patch,
+  -files/superlu-4.0-autotools.patch, -files/superlu-4.2-autotools.patch,
+  -files/superlu-examples.patch, -superlu-4.0-r2.ebuild, -superlu-4.2.ebuild,
+  metadata.xml, superlu-4.3.ebuild:
+  Removed old. Do not install built examples
 
   16 Oct 2012; Justin Lecher <jlec@gentoo.org> superlu-4.0-r2.ebuild,
   superlu-4.1-r1.ebuild, superlu-4.2.ebuild, superlu-4.3.ebuild:
@@ -81,4 +87,3 @@
   +superlu-4.0-r1.ebuild, +files/superlu-4.0-autotools.patch,
   +files/superlu-examples.patch, +metadata.xml:
   Moved from sci overlay to tree
-
diff --git a/sci-libs/superlu/files/4.0-test.patch b/sci-libs/superlu/files/4.0-test.patch
deleted file mode 100644
index c697acfd892e..000000000000
--- a/sci-libs/superlu/files/4.0-test.patch
+++ /dev/null
@@ -1,52 +0,0 @@
-diff --git a/TESTING/cdrive.c b/TESTING/cdrive.c
-index 0ff08e1..6c5cd36 100644
---- a/TESTING/cdrive.c
-+++ b/TESTING/cdrive.c
-@@ -78,7 +78,7 @@ main(int argc, char *argv[])
-     trans_t        trans;
-     SuperLUStat_t  stat;
-     static char    matrix_type[8];
--    static char    equed[1], path[3], sym[1], dist[1];
-+    static char    equed[1], path[4], sym[1], dist[1];
- 
-     /* Fixed set of parameters */
-     int            iseed[]  = {1988, 1989, 1990, 1991};
-diff --git a/TESTING/ddrive.c b/TESTING/ddrive.c
-index 587dd59..d2b12f3 100644
---- a/TESTING/ddrive.c
-+++ b/TESTING/ddrive.c
-@@ -78,7 +78,7 @@ main(int argc, char *argv[])
-     trans_t        trans;
-     SuperLUStat_t  stat;
-     static char    matrix_type[8];
--    static char    equed[1], path[3], sym[1], dist[1];
-+    static char    equed[1], path[4], sym[1], dist[1];
- 
-     /* Fixed set of parameters */
-     int            iseed[]  = {1988, 1989, 1990, 1991};
-diff --git a/TESTING/sdrive.c b/TESTING/sdrive.c
-index b209ae6..d44ff4b 100644
---- a/TESTING/sdrive.c
-+++ b/TESTING/sdrive.c
-@@ -78,7 +78,7 @@ main(int argc, char *argv[])
-     trans_t        trans;
-     SuperLUStat_t  stat;
-     static char    matrix_type[8];
--    static char    equed[1], path[3], sym[1], dist[1];
-+    static char    equed[1], path[4], sym[1], dist[1];
- 
-     /* Fixed set of parameters */
-     int            iseed[]  = {1988, 1989, 1990, 1991};
-diff --git a/TESTING/zdrive.c b/TESTING/zdrive.c
-index 5844f6a..33bd22e 100644
---- a/TESTING/zdrive.c
-+++ b/TESTING/zdrive.c
-@@ -78,7 +78,7 @@ main(int argc, char *argv[])
-     trans_t        trans;
-     SuperLUStat_t  stat;
-     static char    matrix_type[8];
--    static char    equed[1], path[3], sym[1], dist[1];
-+    static char    equed[1], path[4], sym[1], dist[1];
- 
-     /* Fixed set of parameters */
-     int            iseed[]  = {1988, 1989, 1990, 1991};
diff --git a/sci-libs/superlu/files/superlu-4.0-autotools.patch b/sci-libs/superlu/files/superlu-4.0-autotools.patch
deleted file mode 100644
index d54e3ded1db3..000000000000
--- a/sci-libs/superlu/files/superlu-4.0-autotools.patch
+++ /dev/null
@@ -1,327 +0,0 @@
---- Makefile.am.orig	1970-01-01 01:00:00.000000000 +0100
-+++ Makefile.am	2010-09-27 06:03:01.000000000 +0100
-@@ -0,0 +1 @@
-+SUBDIRS = SRC
---- SRC/Makefile.am.orig	1970-01-01 01:00:00.000000000 +0100
-+++ SRC/Makefile.am	2010-09-27 06:19:38.000000000 +0100
-@@ -0,0 +1,97 @@
-+AM_CPPFLAGS = -DAdd_
-+### LAPACK 
-+LAAUX 	= lsame.c xerbla.c
-+SLASRC 	= slacon.c 
-+DLASRC	= dlacon.c
-+CLASRC	= clacon.c scsum1.c icmax1.c
-+ZLASRC	= zlacon.c dzsum1.c izmax1.c
-+SCLAUX 	= slamch.c
-+DZLAUX 	= dlamch.c
-+
-+### SuperLU 
-+ALLAUX 	= superlu_timer.c util.c memory.c get_perm_c.c mmd.c \
-+	  sp_coletree.c sp_preorder.c sp_ienv.c relax_snode.c \
-+	  heap_relax_snode.c colamd.c \
-+	  ilu_relax_snode.c ilu_heap_relax_snode.c mark_relax.c \
-+	  mc64ad.f mc21.f
-+
-+SLUSRC = \
-+	sgssv.c sgssvx.c \
-+	ssp_blas2.c ssp_blas3.c sgscon.c  \
-+	slangs.c sgsequ.c slaqgs.c spivotgrowth.c \
-+	sgsrfs.c sgstrf.c sgstrs.c scopy_to_ucol.c \
-+	ssnode_dfs.c ssnode_bmod.c \
-+	spanel_dfs.c spanel_bmod.c sreadhb.c \
-+	scolumn_dfs.c scolumn_bmod.c spivotL.c spruneL.c \
-+	smemory.c sutil.c smyblas2.c \
-+	sgsisx.c sgsitrf.c sldperm.c \
-+	ilu_sdrop_row.c ilu_ssnode_dfs.c \
-+	ilu_scolumn_dfs.c ilu_spanel_dfs.c ilu_scopy_to_ucol.c \
-+	ilu_spivotL.c sdiagonal.c
-+
-+DLUSRC = \
-+	dgssv.c dgssvx.c \
-+	dsp_blas2.c dsp_blas3.c dgscon.c \
-+	dlangs.c dgsequ.c dlaqgs.c dpivotgrowth.c  \
-+	dgsrfs.c dgstrf.c dgstrs.c dcopy_to_ucol.c \
-+	dsnode_dfs.c dsnode_bmod.c \
-+	dpanel_dfs.c dpanel_bmod.c dreadhb.c \
-+	dcolumn_dfs.c dcolumn_bmod.c dpivotL.c dpruneL.c \
-+	dmemory.c dutil.c dmyblas2.c \
-+	dgsisx.c dgsitrf.c \
-+	dldperm.c \
-+	ilu_ddrop_row.c ilu_dsnode_dfs.c \
-+	ilu_dcolumn_dfs.c ilu_dpanel_dfs.c ilu_dcopy_to_ucol.c \
-+	ilu_dpivotL.c ddiagonal.c
-+
-+CLUSRC = \
-+	scomplex.c cgssv.c cgssvx.c csp_blas2.c csp_blas3.c cgscon.c \
-+	clangs.c cgsequ.c claqgs.c cpivotgrowth.c  \
-+	cgsrfs.c cgstrf.c cgstrs.c ccopy_to_ucol.c \
-+	csnode_dfs.c csnode_bmod.c \
-+	cpanel_dfs.c cpanel_bmod.c creadhb.c \
-+	ccolumn_dfs.c ccolumn_bmod.c cpivotL.c cpruneL.c \
-+	cmemory.c cutil.c cmyblas2.c \
-+	cgsisx.c cgsitrf.c cldperm.c \
-+	ilu_cdrop_row.c ilu_csnode_dfs.c \
-+	ilu_ccolumn_dfs.c ilu_cpanel_dfs.c ilu_ccopy_to_ucol.c \
-+	ilu_cpivotL.c cdiagonal.c
-+
-+ZLUSRC = \
-+	dcomplex.c zgssv.c zgssvx.c zsp_blas2.c zsp_blas3.c zgscon.c \
-+	zlangs.c zgsequ.c zlaqgs.c zpivotgrowth.c  \
-+	zgsrfs.c zgstrf.c zgstrs.c zcopy_to_ucol.c \
-+	zsnode_dfs.c zsnode_bmod.c \
-+	zpanel_dfs.c zpanel_bmod.c zreadhb.c \
-+	zcolumn_dfs.c zcolumn_bmod.c zpivotL.c zpruneL.c \
-+	zmemory.c zutil.c zmyblas2.c \
-+	zgsisx.c zgsitrf.c zldperm.c \
-+	ilu_zdrop_row.c ilu_zsnode_dfs.c \
-+	ilu_zcolumn_dfs.c ilu_zpanel_dfs.c ilu_zcopy_to_ucol.c \
-+	ilu_zpivotL.c zdiagonal.c
-+
-+lib_LTLIBRARIES = libsuperlu.la
-+libsuperlu_la_SOURCES = \
-+	$(ALLAUX) $(LAAUX) \
-+	$(SCLAUX) $(DZLAUX) \
-+	$(SLUSRC) $(SLASRC) \
-+	$(DLUSRC) $(DLASRC) \
-+	$(CLUSRC) $(CLASRC) \
-+	$(ZLUSRC) $(ZLASRC)
-+libsuperlu_la_LIBADD = $(BLAS_LIBS)
-+libsuperlu_la_LDFLAGS = -no-undefined -version-info 4:0:0
-+
-+##################################
-+# Do not optimize these routines #
-+##################################
-+LTCOMPILE_NOOPT = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
-+	--mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
-+	$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS)
-+
-+slamch.lo: slamch.c
-+	$(LTCOMPILE_NOOPT) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-+dlamch.lo: dlamch.c
-+	$(LTCOMPILE_NOOPT) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-+superlu_timer.lo: superlu_timer.c
-+	$(LTCOMPILE_NOOPT) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-+##################################
---- configure.ac.orig	1970-01-01 01:00:00.000000000 +0100
-+++ configure.ac	2010-09-27 06:11:06.000000000 +0100
-@@ -0,0 +1,16 @@
-+# -*- Autoconf -*-
-+AC_PREREQ(2.59)
-+AC_INIT(superlu, 4.0, xsli@lbl.gov)
-+AM_INIT_AUTOMAKE([foreign])
-+AC_CONFIG_HEADER([config.h])
-+AC_PROG_INSTALL
-+AC_PROG_LIBTOOL
-+AC_PROG_F77
-+sinclude(ax_blas.m4)
-+AX_BLAS
-+if test x"$BLAS_LIBS" = x; then
-+   AC_MSG_ERROR([Cannot find blas libraries])
-+fi
-+AC_CHECK_LIB([m], [floor])
-+AC_CONFIG_FILES([Makefile SRC/Makefile])
-+AC_OUTPUT
---- ax_blas.m4.orig	1970-01-01 01:00:00.000000000 +0100
-+++ ax_blas.m4	2010-09-27 06:06:18.000000000 +0100
-@@ -0,0 +1,201 @@
-+# ===========================================================================
-+#          http://www.gnu.org/software/autoconf-archive/ax_blas.html
-+# ===========================================================================
-+#
-+# SYNOPSIS
-+#
-+#   AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-+#
-+# DESCRIPTION
-+#
-+#   This macro looks for a library that implements the BLAS linear-algebra
-+#   interface (see http://www.netlib.org/blas/). On success, it sets the
-+#   BLAS_LIBS output variable to hold the requisite library linkages.
-+#
-+#   To link with BLAS, you should link with:
-+#
-+#     $BLAS_LIBS $LIBS $FLIBS
-+#
-+#   in that order. FLIBS is the output variable of the
-+#   AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
-+#   sometimes necessary in order to link with F77 libraries. Users will also
-+#   need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
-+#   reason.
-+#
-+#   Many libraries are searched for, from ATLAS to CXML to ESSL. The user
-+#   may also use --with-blas=<lib> in order to use some specific BLAS
-+#   library <lib>. In order to link successfully, however, be aware that you
-+#   will probably need to use the same Fortran compiler (which can be set
-+#   via the F77 env. var.) as was used to compile the BLAS library.
-+#
-+#   ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is
-+#   found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
-+#   not found. If ACTION-IF-FOUND is not specified, the default action will
-+#   define HAVE_BLAS.
-+#
-+# LICENSE
-+#
-+#   Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-+#
-+#   This program is free software: you can redistribute it and/or modify it
-+#   under the terms of the GNU General Public License as published by the
-+#   Free Software Foundation, either version 3 of the License, or (at your
-+#   option) any later version.
-+#
-+#   This program is distributed in the hope that it will be useful, but
-+#   WITHOUT ANY WARRANTY; without even the implied warranty of
-+#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-+#   Public License for more details.
-+#
-+#   You should have received a copy of the GNU General Public License along
-+#   with this program. If not, see <http://www.gnu.org/licenses/>.
-+#
-+#   As a special exception, the respective Autoconf Macro's copyright owner
-+#   gives unlimited permission to copy, distribute and modify the configure
-+#   scripts that are the output of Autoconf when processing the Macro. You
-+#   need not follow the terms of the GNU General Public License when using
-+#   or distributing such scripts, even though portions of the text of the
-+#   Macro appear in them. The GNU General Public License (GPL) does govern
-+#   all other use of the material that constitutes the Autoconf Macro.
-+#
-+#   This special exception to the GPL applies to versions of the Autoconf
-+#   Macro released by the Autoconf Archive. When you make and distribute a
-+#   modified version of the Autoconf Macro, you may extend this special
-+#   exception to the GPL to apply to your modified version as well.
-+
-+#serial 11
-+
-+AU_ALIAS([ACX_BLAS], [AX_BLAS])
-+AC_DEFUN([AX_BLAS], [
-+AC_PREREQ(2.50)
-+AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
-+ax_blas_ok=no
-+
-+AC_ARG_WITH(blas,
-+	[AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
-+case $with_blas in
-+	yes | "") ;;
-+	no) ax_blas_ok=disable ;;
-+	-* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
-+	*) BLAS_LIBS="-l$with_blas" ;;
-+esac
-+
-+# Get fortran linker names of BLAS functions to check for.
-+AC_F77_FUNC(sgemm)
-+AC_F77_FUNC(dgemm)
-+
-+ax_blas_save_LIBS="$LIBS"
-+LIBS="$LIBS $FLIBS"
-+
-+# First, check BLAS_LIBS environment variable
-+if test $ax_blas_ok = no; then
-+if test "x$BLAS_LIBS" != x; then
-+	save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
-+	AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+fi
-+
-+# BLAS linked to by default?  (happens on some supercomputers)
-+if test $ax_blas_ok = no; then
-+	save_LIBS="$LIBS"; LIBS="$LIBS"
-+	AC_MSG_CHECKING([if $sgemm is being linked in already])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+
-+# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(atlas, ATL_xerbla,
-+		[AC_CHECK_LIB(f77blas, $sgemm,
-+		[AC_CHECK_LIB(cblas, cblas_dgemm,
-+			[ax_blas_ok=yes
-+			 BLAS_LIBS="-lcblas -lf77blas -latlas"],
-+			[], [-lf77blas -latlas])],
-+			[], [-latlas])])
-+fi
-+
-+# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm,
-+		[AC_CHECK_LIB(dgemm, $dgemm,
-+		[AC_CHECK_LIB(sgemm, $sgemm,
-+			[ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
-+			[], [-lblas])],
-+			[], [-lblas])])
-+fi
-+
-+# BLAS in Intel MKL library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl"])
-+fi
-+
-+# BLAS in Apple vecLib library?
-+if test $ax_blas_ok = no; then
-+	save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
-+	AC_MSG_CHECKING([for $sgemm in -framework vecLib])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+
-+# BLAS in Alpha CXML library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"])
-+fi
-+
-+# BLAS in Alpha DXML library? (now called CXML, see above)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"])
-+fi
-+
-+# BLAS in Sun Performance library?
-+if test $ax_blas_ok = no; then
-+	if test "x$GCC" != xyes; then # only works with Sun CC
-+		AC_CHECK_LIB(sunmath, acosp,
-+			[AC_CHECK_LIB(sunperf, $sgemm,
-+				[BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
-+                                 ax_blas_ok=yes],[],[-lsunmath])])
-+	fi
-+fi
-+
-+# BLAS in SCSL library?  (SGI/Cray Scientific Library)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"])
-+fi
-+
-+# BLAS in SGIMATH library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(complib.sgimath, $sgemm,
-+		     [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
-+fi
-+
-+# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm,
-+		[AC_CHECK_LIB(essl, $sgemm,
-+			[ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
-+			[], [-lblas $FLIBS])])
-+fi
-+
-+# Generic BLAS library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"])
-+fi
-+
-+AC_SUBST(BLAS_LIBS)
-+
-+LIBS="$ax_blas_save_LIBS"
-+
-+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-+if test x"$ax_blas_ok" = xyes; then
-+        ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
-+        :
-+else
-+        ax_blas_ok=no
-+        $2
-+fi
-+])dnl AX_BLAS
diff --git a/sci-libs/superlu/files/superlu-4.2-autotools.patch b/sci-libs/superlu/files/superlu-4.2-autotools.patch
deleted file mode 100644
index 747674897eb6..000000000000
--- a/sci-libs/superlu/files/superlu-4.2-autotools.patch
+++ /dev/null
@@ -1,563 +0,0 @@
-diff -Nur SuperLU_4.2.orig/ax_blas.m4 SuperLU_4.2/ax_blas.m4
---- SuperLU_4.2.orig/ax_blas.m4	1970-01-01 01:00:00.000000000 +0100
-+++ SuperLU_4.2/ax_blas.m4	2011-09-01 06:08:20.000000000 +0100
-@@ -0,0 +1,201 @@
-+# ===========================================================================
-+#          http://www.gnu.org/software/autoconf-archive/ax_blas.html
-+# ===========================================================================
-+#
-+# SYNOPSIS
-+#
-+#   AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
-+#
-+# DESCRIPTION
-+#
-+#   This macro looks for a library that implements the BLAS linear-algebra
-+#   interface (see http://www.netlib.org/blas/). On success, it sets the
-+#   BLAS_LIBS output variable to hold the requisite library linkages.
-+#
-+#   To link with BLAS, you should link with:
-+#
-+#     $BLAS_LIBS $LIBS $FLIBS
-+#
-+#   in that order. FLIBS is the output variable of the
-+#   AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
-+#   sometimes necessary in order to link with F77 libraries. Users will also
-+#   need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
-+#   reason.
-+#
-+#   Many libraries are searched for, from ATLAS to CXML to ESSL. The user
-+#   may also use --with-blas=<lib> in order to use some specific BLAS
-+#   library <lib>. In order to link successfully, however, be aware that you
-+#   will probably need to use the same Fortran compiler (which can be set
-+#   via the F77 env. var.) as was used to compile the BLAS library.
-+#
-+#   ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is
-+#   found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
-+#   not found. If ACTION-IF-FOUND is not specified, the default action will
-+#   define HAVE_BLAS.
-+#
-+# LICENSE
-+#
-+#   Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
-+#
-+#   This program is free software: you can redistribute it and/or modify it
-+#   under the terms of the GNU General Public License as published by the
-+#   Free Software Foundation, either version 3 of the License, or (at your
-+#   option) any later version.
-+#
-+#   This program is distributed in the hope that it will be useful, but
-+#   WITHOUT ANY WARRANTY; without even the implied warranty of
-+#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-+#   Public License for more details.
-+#
-+#   You should have received a copy of the GNU General Public License along
-+#   with this program. If not, see <http://www.gnu.org/licenses/>.
-+#
-+#   As a special exception, the respective Autoconf Macro's copyright owner
-+#   gives unlimited permission to copy, distribute and modify the configure
-+#   scripts that are the output of Autoconf when processing the Macro. You
-+#   need not follow the terms of the GNU General Public License when using
-+#   or distributing such scripts, even though portions of the text of the
-+#   Macro appear in them. The GNU General Public License (GPL) does govern
-+#   all other use of the material that constitutes the Autoconf Macro.
-+#
-+#   This special exception to the GPL applies to versions of the Autoconf
-+#   Macro released by the Autoconf Archive. When you make and distribute a
-+#   modified version of the Autoconf Macro, you may extend this special
-+#   exception to the GPL to apply to your modified version as well.
-+
-+#serial 11
-+
-+AU_ALIAS([ACX_BLAS], [AX_BLAS])
-+AC_DEFUN([AX_BLAS], [
-+AC_PREREQ(2.50)
-+AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
-+ax_blas_ok=no
-+
-+AC_ARG_WITH(blas,
-+	[AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
-+case $with_blas in
-+	yes | "") ;;
-+	no) ax_blas_ok=disable ;;
-+	-* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
-+	*) BLAS_LIBS="-l$with_blas" ;;
-+esac
-+
-+# Get fortran linker names of BLAS functions to check for.
-+AC_F77_FUNC(sgemm)
-+AC_F77_FUNC(dgemm)
-+
-+ax_blas_save_LIBS="$LIBS"
-+LIBS="$LIBS $FLIBS"
-+
-+# First, check BLAS_LIBS environment variable
-+if test $ax_blas_ok = no; then
-+if test "x$BLAS_LIBS" != x; then
-+	save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
-+	AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+fi
-+
-+# BLAS linked to by default?  (happens on some supercomputers)
-+if test $ax_blas_ok = no; then
-+	save_LIBS="$LIBS"; LIBS="$LIBS"
-+	AC_MSG_CHECKING([if $sgemm is being linked in already])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+
-+# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(atlas, ATL_xerbla,
-+		[AC_CHECK_LIB(f77blas, $sgemm,
-+		[AC_CHECK_LIB(cblas, cblas_dgemm,
-+			[ax_blas_ok=yes
-+			 BLAS_LIBS="-lcblas -lf77blas -latlas"],
-+			[], [-lf77blas -latlas])],
-+			[], [-latlas])])
-+fi
-+
-+# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm,
-+		[AC_CHECK_LIB(dgemm, $dgemm,
-+		[AC_CHECK_LIB(sgemm, $sgemm,
-+			[ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
-+			[], [-lblas])],
-+			[], [-lblas])])
-+fi
-+
-+# BLAS in Intel MKL library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl"])
-+fi
-+
-+# BLAS in Apple vecLib library?
-+if test $ax_blas_ok = no; then
-+	save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
-+	AC_MSG_CHECKING([for $sgemm in -framework vecLib])
-+	AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
-+	AC_MSG_RESULT($ax_blas_ok)
-+	LIBS="$save_LIBS"
-+fi
-+
-+# BLAS in Alpha CXML library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"])
-+fi
-+
-+# BLAS in Alpha DXML library? (now called CXML, see above)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"])
-+fi
-+
-+# BLAS in Sun Performance library?
-+if test $ax_blas_ok = no; then
-+	if test "x$GCC" != xyes; then # only works with Sun CC
-+		AC_CHECK_LIB(sunmath, acosp,
-+			[AC_CHECK_LIB(sunperf, $sgemm,
-+				[BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
-+                                 ax_blas_ok=yes],[],[-lsunmath])])
-+	fi
-+fi
-+
-+# BLAS in SCSL library?  (SGI/Cray Scientific Library)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"])
-+fi
-+
-+# BLAS in SGIMATH library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(complib.sgimath, $sgemm,
-+		     [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
-+fi
-+
-+# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm,
-+		[AC_CHECK_LIB(essl, $sgemm,
-+			[ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
-+			[], [-lblas $FLIBS])])
-+fi
-+
-+# Generic BLAS library?
-+if test $ax_blas_ok = no; then
-+	AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"])
-+fi
-+
-+AC_SUBST(BLAS_LIBS)
-+
-+LIBS="$ax_blas_save_LIBS"
-+
-+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-+if test x"$ax_blas_ok" = xyes; then
-+        ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
-+        :
-+else
-+        ax_blas_ok=no
-+        $2
-+fi
-+])dnl AX_BLAS
-diff -Nur SuperLU_4.2.orig/configure.ac SuperLU_4.2/configure.ac
---- SuperLU_4.2.orig/configure.ac	1970-01-01 01:00:00.000000000 +0100
-+++ SuperLU_4.2/configure.ac	2011-09-01 16:50:11.000000000 +0100
-@@ -0,0 +1,16 @@
-+# -*- Autoconf -*-
-+AC_PREREQ(2.59)
-+AC_INIT(superlu, 4.2, xsli@lbl.gov)
-+AM_INIT_AUTOMAKE([foreign])
-+AC_CONFIG_HEADER([config.h])
-+AC_PROG_INSTALL
-+AC_PROG_LIBTOOL
-+AC_PROG_F77
-+sinclude(ax_blas.m4)
-+AX_BLAS
-+if test x"$BLAS_LIBS" = x; then
-+   AC_MSG_ERROR([Cannot find blas libraries])
-+fi
-+AC_CHECK_LIB([m], [floor])
-+AC_CONFIG_FILES([Makefile SRC/Makefile superlu.pc])
-+AC_OUTPUT
-diff -Nur SuperLU_4.2.orig/EXAMPLE/Makefile SuperLU_4.2/EXAMPLE/Makefile
---- SuperLU_4.2.orig/EXAMPLE/Makefile	2011-08-12 19:03:34.000000000 +0100
-+++ SuperLU_4.2/EXAMPLE/Makefile	2011-09-01 06:13:22.000000000 +0100
-@@ -1,4 +1,3 @@
--include ../make.inc
- 
- #######################################################################
- #  This makefile creates the example programs for the linear equation
-@@ -32,7 +31,9 @@
- #
- #######################################################################
- 
--HEADER   = ../SRC
-+HEADER = $(shell pkg-config --cflags superlu)
-+LIBS   = $(shell pkg-config --libs superlu)
-+CDEFS  = -DAdd_
- 
- SLINEXM		= slinsol.o
- SLINEXM1	= slinsol1.o
-@@ -67,7 +68,6 @@
- ZITSOL	     	= zitersol.o zfgmr.o
- ZITSOL1	     	= zitersol1.o zfgmr.o
- 
--
- all:    single double complex complex16
- 
- single:    slinsol slinsol1 slinsolx slinsolx1 slinsolx2 sitersol sitersol1
-@@ -77,97 +77,97 @@
- complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zitersol zitersol1
- 
- slinsol: $(SLINEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SLINEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SLINEXM) $(LIBS) -o $@
- 
- slinsol1: $(SLINEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SLINEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SLINEXM1) $(LIBS) -o $@
- 
- slinsolx: $(SLINXEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SLINXEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SLINXEXM) $(LIBS) -o $@
- 
- slinsolx1: $(SLINXEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SLINXEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SLINXEXM1) $(LIBS) -o $@
- 
- slinsolx2: $(SLINXEXM2) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SLINXEXM2) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SLINXEXM2) $(LIBS) -o $@
- 
- sitersol: $(SITSOL) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SITSOL) $(LIBS) -o $@
- 
- sitersol1: $(SITSOL1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SITSOL1) $(LIBS) -o $@
- 
- dlinsol: $(DLINEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DLINEXM) $(LIBS) -o $@
- 
- dlinsol1: $(DLINEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DLINEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DLINEXM1) $(LIBS) -o $@
- 
- dlinsolx: $(DLINXEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DLINXEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DLINXEXM) $(LIBS) -o $@
- 
- dlinsolx1: $(DLINXEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DLINXEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DLINXEXM1) $(LIBS) -o $@
- 
- dlinsolx2: $(DLINXEXM2) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DLINXEXM2) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DLINXEXM2) $(LIBS) -o $@
- 
- superlu: $(SUPERLUEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(SUPERLUEXM) $(LIBS) -o $@
- 
- ditersol: $(DITSOL) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DITSOL) $(LIBS) -o $@
- 
- ditersol1: $(DITSOL1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(DITSOL1) $(LIBS) -o $@
- 
- clinsol: $(CLINEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CLINEXM) $(LIBS) -o $@
- 
- clinsol1: $(CLINEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CLINEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CLINEXM1) $(LIBS) -o $@
- 
- clinsolx: $(CLINXEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CLINXEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CLINXEXM) $(LIBS) -o $@
- 
- clinsolx1: $(CLINXEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CLINXEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CLINXEXM1) $(LIBS) -o $@
- 
- clinsolx2: $(CLINXEXM2) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CLINXEXM2) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CLINXEXM2) $(LIBS) -o $@
- 
- citersol: $(CITSOL) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CITSOL) $(LIBS)  -o $@
- 
- citersol1: $(CITSOL1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(CITSOL1) $(LIBS)  -o $@
- 
- zlinsol: $(ZLINEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZLINEXM) $(LIBS)  -o $@
- 
- zlinsol1: $(ZLINEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZLINEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZLINEXM1) $(LIBS)  -o $@
- 
- zlinsolx: $(ZLINXEXM) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZLINXEXM) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZLINXEXM) $(LIBS)  -o $@
- 
- zlinsolx1: $(ZLINXEXM1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZLINXEXM1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZLINXEXM1) $(LIBS)  -o $@
- 
- zlinsolx2: $(ZLINXEXM2) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZLINXEXM2) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZLINXEXM2) $(LIBS)  -o $@
- 
- zitersol: $(ZITSOL) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAGS) $(ZITSOL) $(LIBS)  -o $@
- 
- zitersol1: $(ZITSOL1) $(SUPERLULIB)
--	$(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@
-+	$(LD) $(LDFLAG) $(ZITSOL1) $(LIBS)  -o $@
- 
- .c.o:
--	$(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE)
-+	$(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE)
- 
- .f.o:
--	$(FORTRAN) $(FFLAGS) -c $< $(VERBOSE)
-+	$(FC) $(FFLAGS) -c $< $(VERBOSE)
- 
- clean:	
- 	rm -f *.o *linsol *linsol1 *linsolx *linsolx1 *linsolx2 \
-diff -Nur SuperLU_4.2.orig/FORTRAN/Makefile SuperLU_4.2/FORTRAN/Makefile
---- SuperLU_4.2.orig/FORTRAN/Makefile	2011-08-10 01:30:30.000000000 +0100
-+++ SuperLU_4.2/FORTRAN/Makefile	2011-09-01 06:08:20.000000000 +0100
-@@ -1,12 +1,12 @@
--include ../make.inc
-+#include ../make.inc
- 
- #######################################################################
- #  This makefile creates the Fortran example interface to use the
- #  C routines in SuperLU.
- #######################################################################
- 
--HEADER   = ../SRC
--LIBS	= $(SUPERLULIB) $(BLASLIB) -lm
-+HEADER   = $(shell pkg-config --cflags superlu)
-+LIBS	= $(shell pkg-config --libs superlu)
- 
- # double real
- F77EXM	= f77_main.o hbcode1.o c_fortran_dgssv.o
-@@ -17,19 +17,19 @@
- all:	f77exm zf77exm
- 
- f77exm: $(F77EXM) $(SUPERLULIB)
--	$(FORTRAN) $(LOADOPTS) $(F77EXM) $(LIBS) -o $@
-+	$(FC) $(LDFLAGS) $(F77EXM) $(LIBS) -o $@
- 
- zf77exm: $(ZF77EXM) $(SUPERLULIB)
- 	$(FORTRAN) $(LOADOPTS) $(ZF77EXM) $(LIBS) -o $@
- 
- c_fortran_zgssv.o: c_fortran_zgssv.c
--	$(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE)
-+	$(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE)
- 
- .c.o:
--	$(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE)
-+	$(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE)
- 
- .f.o:
--	$(FORTRAN) $(FFLAGS) -c $< $(VERBOSE)
-+	$(FC) $(FFLAGS) -c $< $(VERBOSE)
- 
- clean:	
- 	rm -f *.o f77exm zf77exm
-diff -Nur SuperLU_4.2.orig/Makefile.am SuperLU_4.2/Makefile.am
---- SuperLU_4.2.orig/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ SuperLU_4.2/Makefile.am	2011-09-01 06:08:20.000000000 +0100
-@@ -0,0 +1,4 @@
-+SUBDIRS = SRC
-+
-+pkgconfigdir = $(libdir)/pkgconfig
-+pkgconfig_DATA = superlu.pc
-diff -Nur SuperLU_4.2.orig/SRC/Makefile.am SuperLU_4.2/SRC/Makefile.am
---- SuperLU_4.2.orig/SRC/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ SuperLU_4.2/SRC/Makefile.am	2011-09-01 17:12:01.000000000 +0100
-@@ -0,0 +1,110 @@
-+AM_CPPFLAGS = -DAdd_
-+
-+### headers
-+noinst_HEADERS = \
-+	colamd.h \
-+	html_mainpage.h
-+
-+src_includedir = $(includedir)/superlu
-+src_include_HEADERS = \
-+	slu_cdefs.h \
-+	slu_ddefs.h \
-+	slu_sdefs.h \
-+	slu_zdefs.h \
-+	slu_Cnames.h \
-+	slu_dcomplex.h \
-+	slu_scomplex.h \
-+	slu_util.h \
-+	superlu_enum_consts.h \
-+	supermatrix.h
-+
-+### LAPACK 
-+LAAUX 	= lsame.c xerbla.c
-+SLASRC 	= slacon.c 
-+DLASRC	= dlacon.c
-+CLASRC	= clacon.c scsum1.c icmax1.c
-+ZLASRC	= zlacon.c dzsum1.c izmax1.c
-+
-+
-+##################################
-+# Do not optimize these routines #
-+##################################
-+CFLAGS_SAV=@CFLAGS@
-+CFLAGS= 
-+noinst_LTLIBRARIES = libnoopt.la
-+libnoopt_la_SOURCES =  slamch.c dlamch.c superlu_timer.c
-+libnoopt_la_CFLAGS = -O0
-+
-+### SuperLU
-+ALLAUX 	= util.c memory.c get_perm_c.c mmd.c \
-+	  sp_coletree.c sp_preorder.c sp_ienv.c relax_snode.c \
-+	  heap_relax_snode.c colamd.c \
-+	  ilu_relax_snode.c ilu_heap_relax_snode.c mark_relax.c \
-+	  mc64ad.f qselect.f
-+
-+SLUSRC = \
-+	sgssv.c sgssvx.c \
-+	ssp_blas2.c ssp_blas3.c sgscon.c  \
-+	slangs.c sgsequ.c slaqgs.c spivotgrowth.c \
-+	sgsrfs.c sgstrf.c sgstrs.c scopy_to_ucol.c \
-+	ssnode_dfs.c ssnode_bmod.c \
-+	spanel_dfs.c spanel_bmod.c sreadhb.c \
-+	scolumn_dfs.c scolumn_bmod.c spivotL.c spruneL.c \
-+	smemory.c sutil.c smyblas2.c \
-+	sgsisx.c sgsitrf.c sldperm.c \
-+	ilu_sdrop_row.c ilu_ssnode_dfs.c \
-+	ilu_scolumn_dfs.c ilu_spanel_dfs.c ilu_scopy_to_ucol.c \
-+	ilu_spivotL.c sdiagonal.c
-+
-+DLUSRC = \
-+	dgssv.c dgssvx.c \
-+	dsp_blas2.c dsp_blas3.c dgscon.c \
-+	dlangs.c dgsequ.c dlaqgs.c dpivotgrowth.c  \
-+	dgsrfs.c dgstrf.c dgstrs.c dcopy_to_ucol.c \
-+	dsnode_dfs.c dsnode_bmod.c \
-+	dpanel_dfs.c dpanel_bmod.c dreadhb.c \
-+	dcolumn_dfs.c dcolumn_bmod.c dpivotL.c dpruneL.c \
-+	dmemory.c dutil.c dmyblas2.c \
-+	dgsisx.c dgsitrf.c \
-+	dldperm.c \
-+	ilu_ddrop_row.c ilu_dsnode_dfs.c \
-+	ilu_dcolumn_dfs.c ilu_dpanel_dfs.c ilu_dcopy_to_ucol.c \
-+	ilu_dpivotL.c ddiagonal.c
-+
-+CLUSRC = \
-+	scomplex.c cgssv.c cgssvx.c csp_blas2.c csp_blas3.c cgscon.c \
-+	clangs.c cgsequ.c claqgs.c cpivotgrowth.c  \
-+	cgsrfs.c cgstrf.c cgstrs.c ccopy_to_ucol.c \
-+	csnode_dfs.c csnode_bmod.c \
-+	cpanel_dfs.c cpanel_bmod.c creadhb.c \
-+	ccolumn_dfs.c ccolumn_bmod.c cpivotL.c cpruneL.c \
-+	cmemory.c cutil.c cmyblas2.c \
-+	cgsisx.c cgsitrf.c cldperm.c \
-+	ilu_cdrop_row.c ilu_csnode_dfs.c \
-+	ilu_ccolumn_dfs.c ilu_cpanel_dfs.c ilu_ccopy_to_ucol.c \
-+	ilu_cpivotL.c cdiagonal.c
-+
-+ZLUSRC = \
-+	dcomplex.c zgssv.c zgssvx.c zsp_blas2.c zsp_blas3.c zgscon.c \
-+	zlangs.c zgsequ.c zlaqgs.c zpivotgrowth.c  \
-+	zgsrfs.c zgstrf.c zgstrs.c zcopy_to_ucol.c \
-+	zsnode_dfs.c zsnode_bmod.c \
-+	zpanel_dfs.c zpanel_bmod.c zreadhb.c \
-+	zcolumn_dfs.c zcolumn_bmod.c zpivotL.c zpruneL.c \
-+	zmemory.c zutil.c zmyblas2.c \
-+	zgsisx.c zgsitrf.c zldperm.c \
-+	ilu_zdrop_row.c ilu_zsnode_dfs.c \
-+	ilu_zcolumn_dfs.c ilu_zpanel_dfs.c ilu_zcopy_to_ucol.c \
-+	ilu_zpivotL.c zdiagonal.c
-+
-+lib_LTLIBRARIES = libsuperlu.la
-+libsuperlu_la_SOURCES = \
-+	$(NOOPTAUX) \
-+	$(ALLAUX) $(LAAUX) \
-+	$(SLUSRC) $(SLASRC) \
-+	$(DLUSRC) $(DLASRC) \
-+	$(CLUSRC) $(CLASRC) \
-+	$(ZLUSRC) $(ZLASRC)
-+libsuperlu_la_CFLAGS = $(CFLAGS_SAV)
-+libsuperlu_la_LIBADD = $(BLAS_LIBS) libnoopt.la
-+libsuperlu_la_LDFLAGS = -no-undefined -version-info 4:2:0
-diff -Nur SuperLU_4.2.orig/superlu.pc.in SuperLU_4.2/superlu.pc.in
---- SuperLU_4.2.orig/superlu.pc.in	1970-01-01 01:00:00.000000000 +0100
-+++ SuperLU_4.2/superlu.pc.in	2011-09-01 16:51:20.000000000 +0100
-@@ -0,0 +1,13 @@
-+prefix=@prefix@
-+exec_prefix=@exec_prefix@
-+libdir=@libdir@
-+includedir=@includedir@
-+
-+Name: @PACKAGE_NAME@
-+Description: Sparse LU factorization library
-+Version: @PACKAGE_VERSION@
-+URL: http://crd.lbl.gov/~xiaoye/SuperLU/
-+Libs: -L${libdir} -lsuperlu 
-+Libs.private: -lm @FLIBS@
-+Requires: blas
-+Cflags: -I${includedir}/superlu
diff --git a/sci-libs/superlu/files/superlu-examples.patch b/sci-libs/superlu/files/superlu-examples.patch
deleted file mode 100644
index 7183d9815506..000000000000
--- a/sci-libs/superlu/files/superlu-examples.patch
+++ /dev/null
@@ -1,13 +0,0 @@
---- EXAMPLE/Makefile.orig	2008-01-31 17:16:16.008471873 +0000
-+++ EXAMPLE/Makefile	2008-01-31 17:20:16.581889615 +0000
-@@ -19,4 +19,9 @@
--include ../make.inc
-+SUPERLULIB   = -lsuperlu
-+BLASLIB      = $(BLAS_LIBS)
-+FORTRAN      = $(FC)
-+LOADER       = $(LD)
-+LOADOPTS     = $(LDFLAGS)
-+CDEFS        = -DAdd_
- 
- #######################################################################
- #  This makefile creates the example programs for the linear equation
diff --git a/sci-libs/superlu/metadata.xml b/sci-libs/superlu/metadata.xml
index 9292b169510f..101acb6868f3 100644
--- a/sci-libs/superlu/metadata.xml
+++ b/sci-libs/superlu/metadata.xml
@@ -1,8 +1,8 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<herd>sci</herd>
-	<longdescription lang="en">
+<herd>sci</herd>
+<longdescription lang="en">
   SuperLU is a general purpose library for the direct solution of large,
   sparse, nonsymmetric systems of linear equations on high performance
   machines. The library is written in C and is callable from either C or
diff --git a/sci-libs/superlu/superlu-4.0-r2.ebuild b/sci-libs/superlu/superlu-4.0-r2.ebuild
deleted file mode 100644
index bc2d2e58d38f..000000000000
--- a/sci-libs/superlu/superlu-4.0-r2.ebuild
+++ /dev/null
@@ -1,79 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/superlu-4.0-r2.ebuild,v 1.5 2012/10/16 19:34:38 jlec Exp $
-
-EAPI="2"
-
-inherit autotools eutils fortran-2 toolchain-funcs
-
-MY_PN=SuperLU
-
-DESCRIPTION="Sparse LU factorization library"
-HOMEPAGE="http://crd.lbl.gov/~xiaoye/SuperLU/"
-SRC_URI="${HOMEPAGE}/${PN}_${PV}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples static-libs test"
-
-RDEPEND="
-	virtual/blas"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig
-	test? ( app-shells/tcsh )"
-
-S="${WORKDIR}/${MY_PN}_${PV}"
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${P}-autotools.patch \
-		"${FILESDIR}"/${PN}-examples.patch \
-		"${FILESDIR}"/${PV}-test.patch
-	eautoreconf
-}
-
-src_configure() {
-	econf \
-		--with-blas="$(pkg-config --libs blas)" \
-		$(use_enable static-libs static)
-}
-
-src_test() {
-	cd TESTING/MATGEN
-	emake \
-		FORTRAN="$(tc-getFC)" \
-		LOADER="$(tc-getCC)" \
-		CFLAGS="${CFLAGS}" \
-		FFLAGS="${FFLAGS}" \
-		LOADOPTS="${LDFLAGS}" \
-		BLASLIB="$(pkg-config --libs blas)" \
-		CC="$(tc-getCC)" \
-		|| die "emake matrix generation failed"
-	cd ..
-	emake \
-		CC="$(tc-getCC)" \
-		FORTRAN="$(tc-getFC)" \
-		LOADER="$(tc-getCC)" \
-		CFLAGS="${CFLAGS}" \
-		FFLAGS="${FFLAGS}" \
-		LOADOPTS="${LDFLAGS}" \
-		SUPERLULIB="../SRC/.libs/libsuperlu.so" \
-		BLASLIB="$(pkg-config --libs blas)" \
-		LD_LIBRARY_PATH="../SRC/.libs" \
-		|| die "emake test failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "emake install failed"
-
-	insinto /usr/include/${PN}
-	doins SRC/*.h || die
-
-	dodoc README
-	use doc && newdoc INSTALL/ug.ps userguide.ps
-	if use examples; then
-		insinto /usr/share/doc/${PF}
-		newins -r EXAMPLE examples
-	fi
-}
diff --git a/sci-libs/superlu/superlu-4.2.ebuild b/sci-libs/superlu/superlu-4.2.ebuild
deleted file mode 100644
index c385f5e2a28b..000000000000
--- a/sci-libs/superlu/superlu-4.2.ebuild
+++ /dev/null
@@ -1,61 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/superlu-4.2.ebuild,v 1.3 2012/10/16 19:34:38 jlec Exp $
-
-EAPI=4
-
-inherit autotools eutils fortran-2 toolchain-funcs multilib
-
-MY_PN=SuperLU
-
-DESCRIPTION="Sparse LU factorization library"
-HOMEPAGE="http://crd.lbl.gov/~xiaoye/SuperLU/"
-SRC_URI="${HOMEPAGE}/${PN}_${PV}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples static-libs test"
-
-RDEPEND="
-	virtual/blas"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig
-	test? ( app-shells/tcsh )"
-
-S="${WORKDIR}/${MY_PN}_${PV}"
-
-src_prepare() {
-	epatch "${FILESDIR}"/${P}-autotools.patch
-	eautoreconf
-}
-
-src_configure() {
-	econf \
-		--with-blas="$(pkg-config --libs blas)" \
-		$(use_enable static-libs static)
-}
-
-src_test() {
-	cd TESTING
-	emake -j1 \
-		CC="$(tc-getCC)" \
-		FORTRAN="$(tc-getFC)" \
-		LOADER="$(tc-getCC)" \
-		CFLAGS="${CFLAGS}" \
-		FFLAGS="${FFLAGS}" \
-		LOADOPTS="${LDFLAGS}" \
-		BLASLIB="$(pkg-config --libs blas)" \
-		SUPERLULIB="${S}/SRC/.libs/libsuperlu$(get_libname)" \
-		LD_LIBRARY_PATH="${S}/SRC/.libs" \
-		DYLD_LIBRARY_PATH="${S}/SRC/.libs"
-}
-
-src_install() {
-	default
-	use doc && dodoc DOC/ug.pdf && dohtml DOC/html/*
-	if use examples; then
-		insinto /usr/share/doc/${PF}/examples
-		doins -r EXAMPLE FORTRAN
-	fi
-}
diff --git a/sci-libs/superlu/superlu-4.3.ebuild b/sci-libs/superlu/superlu-4.3.ebuild
index 561cfde67de1..e53dcb9fe82d 100644
--- a/sci-libs/superlu/superlu-4.3.ebuild
+++ b/sci-libs/superlu/superlu-4.3.ebuild
@@ -1,10 +1,11 @@
 # Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/superlu-4.3.ebuild,v 1.5 2012/10/16 19:34:38 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/superlu/superlu-4.3.ebuild,v 1.6 2012/12/11 18:29:59 bicatali Exp $
 
 EAPI=4
 
 AUTOTOOLS_AUTORECONF=true
+AUTOTOOLS_IN_SOURCE_BUILD=1
 
 inherit autotools-utils fortran-2 toolchain-funcs multilib
 
@@ -27,7 +28,6 @@ DEPEND="${RDEPEND}
 
 S="${WORKDIR}/${MY_PN}_${PV}"
 
-AUTOTOOLS_IN_SOURCE_BUILD=1
 PATCHES=( "${FILESDIR}"/${P}-autotools.patch )
 
 pkg_setup() {
@@ -36,12 +36,13 @@ pkg_setup() {
 }
 
 src_configure() {
-	local myeconfargs=( --with-blas="$(pkg-config --libs blas)" )
+	local myeconfargs=( --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" )
 	autotools-utils_src_configure
+	rm EXAMPLE/*itersol1
 }
 
 src_test() {
-	cd "${AUTOTOOLS_BUILD_DIR}"/TESTING
+	cd "${BUILD_DIR}"/TESTING
 	emake -j1 \
 		CC="$(tc-getCC)" \
 		FORTRAN="$(tc-getFC)" \
@@ -49,7 +50,7 @@ src_test() {
 		CFLAGS="${CFLAGS}" \
 		FFLAGS="${FFLAGS}" \
 		LOADOPTS="${LDFLAGS}" \
-		BLASLIB="$(pkg-config --libs blas)" \
+		BLASLIB="$($(tc-getPKG_CONFIG) --libs blas)" \
 		SUPERLULIB="${S}/SRC/.libs/libsuperlu$(get_libname)" \
 		LD_LIBRARY_PATH="${S}/SRC/.libs" \
 		DYLD_LIBRARY_PATH="${S}/SRC/.libs"