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| author |   Donnie Berkholz <dberkholz@gentoo.org> | 2008-04-25 23:21:08 -0700 |
|---|---|---|
| committer | Donnie Berkholz <dberkholz@gentoo.org> | 2008-04-25 23:21:08 -0700 |
| commit | 2ab78b024135dbd58d5bb3f7f84b44f5bd713512 (patch) | |
| tree | 138838ec942cd0fe5b49b7dd0090529cea367cb8 /sci-biology | |
| parent | guile-gnome-platform: bump to 2.15.98. (diff) | |
| download | dberkholz-2ab78b024135dbd58d5bb3f7f84b44f5bd713512.tar.gz dberkholz-2ab78b024135dbd58d5bb3f7f84b44f5bd713512.tar.bz2 dberkholz-2ab78b024135dbd58d5bb3f7f84b44f5bd713512.zip | |
readseq: bump to java version, 20080420.
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/readseq/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/readseq/readseq-20080420.ebuild | 37 |
2 files changed, 39 insertions, 0 deletions
diff --git a/sci-biology/readseq/Manifest b/sci-biology/readseq/Manifest new file mode 100644 index 0000000..47f4d90 --- /dev/null +++ b/sci-biology/readseq/Manifest @@ -0,0 +1,2 @@ +DIST readseq-source-20080420.zip 627341 RMD160 7931de08b53548908de3caee835e5a2e3398fe3b SHA1 89e250de9270f2d89f2064b08a23a165f5edec05 SHA256 d91ccadcbf5fde29525c639ece6ae132e0db863a7e63f96f69647e591617e8dd +EBUILD readseq-20080420.ebuild 802 RMD160 4b7c6e4e1043c3fd133afb98470ed9d3324e8cfc SHA1 61c92130b207ac9e65590fb61e8ea1181e32323f SHA256 a0dd56935e8a8a0eea9c50c0b724ac2ff277ec808901b59aa885e8180eb77441 diff --git a/sci-biology/readseq/readseq-20080420.ebuild b/sci-biology/readseq/readseq-20080420.ebuild new file mode 100644 index 0000000..089b770 --- /dev/null +++ b/sci-biology/readseq/readseq-20080420.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=1 + +inherit java-pkg-2 java-ant-2 + +MY_P="${PN}-source-${PV}" +DESCRIPTION="Reads and writes nucleic/protein sequences in various formats." +HOMEPAGE="http://iubio.bio.indiana.edu/soft/molbio/readseq/" +SRC_URI="mirror://gentoo/${MY_P}.zip" +LICENSE="public-domain" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" +COMMON="dev-java/xerces:2 + dev-java/jaxp" +RDEPEND="${COMMON} + >=virtual/jre-1.4" +DEPEND="${COMMON} + >=virtual/jdk-1.4 + app-arch/unzip" +S=${WORKDIR} + +src_unpack() { + unpack ${A} + cd "${S}" + java-pkg_jar-from xerces-2 xercesImpl.jar lib/ibm-xml4j-min.jar + java-pkg_jar-from jaxp jaxp-ri.jar lib/orgxml.jar +} + +src_install() { + java-pkg_dojar build/readseq.jar + + java-pkg_dolauncher +} |