diff options
| author |   Pacho Ramos <pacho@gentoo.org> | 2021-11-06 09:07:48 +0100 |
|---|---|---|
| committer | Pacho Ramos <pacho@gentoo.org> | 2021-11-06 09:52:56 +0100 |
| commit | 73ffa274b37fea4fb561d68cbe1cb74d1294b9b8 (patch) | |
| tree | 54dfcd24c216c5ca90f2785044906414595fb3bb /sci-chemistry/dssp | |
| parent | sci-chemistry/dssp: gromacs-2022 will support dssp-4 (diff) | |
| download | gentoo-73ffa274b37fea4fb561d68cbe1cb74d1294b9b8.tar.gz gentoo-73ffa274b37fea4fb561d68cbe1cb74d1294b9b8.tar.bz2 gentoo-73ffa274b37fea4fb561d68cbe1cb74d1294b9b8.zip | |
sci-chemistry/dssp: Drop old
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
Diffstat (limited to 'sci-chemistry/dssp')
| -rw-r--r-- | sci-chemistry/dssp/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-2.2.1-r2.ebuild | 45 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild | 33 |
3 files changed, 0 insertions, 79 deletions
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index 9fd132f8a296..2eecf341c882 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -1,4 +1,3 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1bc820a0df0db6a5f78ac0229aafdd47a60b8fd6f4832abf0399663c53f9e898c75f08ecbe22b141c8da SHA512 4a273714d6b3230daea166caa7f4117d5ccb225bea0cf1bc2eb61539b6cc8e227d0ba19047d61f0ad0d1d6bc2efdec9c193bd44341e15ef0950acb4a22498811 DIST dssp-3.0.11.tar.gz 168085 BLAKE2B e1c42fd22cfb2287f10b5deae48b56a4583d4a67737a3485dcbd160d1597a15c2d5105c3794c875d8001abede1c014efb4f7f5b7c250f867bdf9ed95a0860217 SHA512 a0cfe44e517ff1f909ef2928b62ae2c639c6bddfd8a0fb538883f647fd2771e00da68e0fd2521aa02ba3c6d1b0c9b784b7fe142392af3a3abf6ea89f1546bd9d -DIST dssp-4.0.1_p20210831.tar.gz 121793 BLAKE2B 1e028b086b418772a93db350f8084d1786996ff6ea935d236b1431d8f4a07c0b33ebf374a4c4d5d4d243952f3f56e29a548ce09763863a1e0c529755fba6c211 SHA512 62f1ac781dd3d6f3436e6c155ae1a470d0baf6a6d9f6d6729034a7a5ef41550f76d0473c688d235279336306c9f3598377c056cddd6d00a89a826fbb04c1bfb3 DIST dssp-4.0.3.tar.gz 122872 BLAKE2B f88c330370645b4bd4e89656ad676e443a33c38d7882145bc60e329f823eb761777713df6c7ae44550d10bcd22256ac16db358587cadd39efd6268dd869655d4 SHA512 31ca481b097c9c59f407e35eb8175638b5e4102991007090b5b4ea30db0b076f97cff45d0aa9ae01a826f7673258464b572d68714f00e210db26020cea4be094 diff --git a/sci-chemistry/dssp/dssp-2.2.1-r2.ebuild b/sci-chemistry/dssp/dssp-2.2.1-r2.ebuild deleted file mode 100644 index 63075d4d4290..000000000000 --- a/sci-chemistry/dssp/dssp-2.2.1-r2.ebuild +++ /dev/null @@ -1,45 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit toolchain-funcs - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/" -SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz" - -LICENSE="Boost-1.0" -SLOT="0" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" -IUSE="" - -RDEPEND="dev-libs/boost:=[threads(+)]" -DEPEND="${RDEPEND}" - -PATCHES=( - "${FILESDIR}"/${PN}-2.1.0-gentoo.patch - "${FILESDIR}"/${PN}-2.2.1-boost-1.65-tr1-removal.patch -) - -src_configure() { - tc-export CXX - - cat >> make.config <<- EOF || die - BOOST_LIB_SUFFIX = -mt - BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)" - BOOST_INC_DIR = "${EPREFIX}/usr/include" - EOF -} - -src_install() { - dobin mkdssp - dosym mkdssp /usr/bin/dssp - doman doc/mkdssp.1 - dodoc README.txt changelog - - cat >> "${T}"/30-${PN} <<- EOF || die - DSSP="${EPREFIX}"/usr/bin/${PN} - EOF - doenvd "${T}"/30-${PN} -} diff --git a/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild b/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild deleted file mode 100644 index ca051ca5a0d2..000000000000 --- a/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild +++ /dev/null @@ -1,33 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 -inherit cmake - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" - -COMMIT="728cc7c6c8d95460d8db453cf7adb25a89ba15f6" -SRC_URI="https://github.com/PDB-REDO/${PN}/archive/${COMMIT}.tar.gz -> ${P}.tar.gz" -S="${WORKDIR}/${PN}-${COMMIT}" - -LICENSE="BSD-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -BDEPEND=" - >=dev-libs/boost-1.70.0:=[bzip2,zlib,threads(+)] - >=sci-libs/libcifpp-1.1.1 -" -DEPEND="" -RDEPEND="${BDEPEND}" - -pkg_postinst() { - if has_version sci-chemistry/gromacs; then - ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" - ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" - ewarn - ewarn "Feel free to mask newer versions if needed." - fi -} |