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| author |   Pacho Ramos <pacho@gentoo.org> | 2024-10-17 10:49:25 +0200 |
|---|---|---|
| committer | Pacho Ramos <pacho@gentoo.org> | 2024-10-17 10:50:51 +0200 |
| commit | 887986878e2a4e4440b4165647879312e526ee3b (patch) | |
| tree | 5f1bb52db82c2985f9618c290d1b5c2ce7249fed /sci-chemistry | |
| parent | sci-libs/libcifpp: add 7.0.6 (diff) | |
| download | gentoo-887986878e2a4e4440b4165647879312e526ee3b.tar.gz gentoo-887986878e2a4e4440b4165647879312e526ee3b.tar.bz2 gentoo-887986878e2a4e4440b4165647879312e526ee3b.zip | |
sci-chemistry/dssp: add 4.4.8
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/dssp/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-4.4.8.ebuild | 55 |
2 files changed, 56 insertions, 0 deletions
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index 34adeb159346..e30dccf69c8f 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -2,3 +2,4 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1b DIST dssp-3.0.11.tar.gz 168085 BLAKE2B e1c42fd22cfb2287f10b5deae48b56a4583d4a67737a3485dcbd160d1597a15c2d5105c3794c875d8001abede1c014efb4f7f5b7c250f867bdf9ed95a0860217 SHA512 a0cfe44e517ff1f909ef2928b62ae2c639c6bddfd8a0fb538883f647fd2771e00da68e0fd2521aa02ba3c6d1b0c9b784b7fe142392af3a3abf6ea89f1546bd9d DIST dssp-4.4.4.1.tar.gz 162809 BLAKE2B 6c3f588a48778cf5f20b40b93736e150a4d366bf44d214b4064362c2a3bce69db415f5d12568a8523d99e2e5a47749d450ff0251dc3035628dbef9343d37e99a SHA512 291810391d74da7ab65bcf4aab61fa4ae1a5518a361fa02d5c15ed0e5c94139fde65e7612a978f5326bd7d93f2ac6ea01b2b65514d6b64f4d062adf112c48deb DIST dssp-4.4.7.tar.gz 163831 BLAKE2B 195c8fb183df00105098967850b01c0d6acf776f7cfa409fc536c8291e7a467da2adfb5f34d8191e33dbb29bfd254cd414c1b7b76ed3f3b854928c4dc8a5fcdd SHA512 2fe2d8a494b570934c0d28804fe69b6569089ded58ec92bf3d83b25ce60a3b9486490909e187b511328f13498ca9027869e922d95a355cf0e21c2564c2db1b5a +DIST dssp-4.4.8.tar.gz 164050 BLAKE2B 0f048b5425f3ecb0e9278da81e2274e817b5ba5ed33a372d0e4c0b0d0600f9ebee2b125f7411dcc4af5d56e2f86cf0d7f10608467b24dd886ca559f7c4b60e6a SHA512 a21c79e56662d926e8476ffc7ccd84dec182a7bbd98c08b3df61ed88c99ee82e1522b69156cdea0abf96d93bc69a0a491b04662a9312d2681785116074151a61 diff --git a/sci-chemistry/dssp/dssp-4.4.8.ebuild b/sci-chemistry/dssp/dssp-4.4.8.ebuild new file mode 100644 index 000000000000..d5e51fe40fec --- /dev/null +++ b/sci-chemistry/dssp/dssp-4.4.8.ebuild @@ -0,0 +1,55 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +inherit cmake + +DESCRIPTION="The protein secondary structure standard" +HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" +SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +# doc disabled as it only generates a PDF from the manpage for now +# https://github.com/PDB-REDO/dssp/issues/64 +#IUSE="doc" + +CDEPEND=" + dev-libs/boost:=[zlib] + >=dev-libs/libmcfp-1.2.2 + >=sci-libs/libcifpp-7.0.3 +" +BDEPEND="${CDEPEND} + dev-cpp/catch:0 +" +# doc? ( +# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc ) +# dev-python/weasyprint +# ) +RDEPEND="${CDEPEND}" + +#src_prepare() { +# # wkhtmltopdf is not available on Gentoo +# sed -i -e \ +# 's/-t html/-t html --pdf-engine=weasyprint/' \ +# CMakeLists.txt +# cmake_src_prepare +#} + +src_configure() { + local mycmakeargs=( + #-DBUILD_DOCUMENTATION=$(usex doc) + -DBUILD_DOCUMENTATION=NO + ) + cmake_src_configure +} + +pkg_postinst() { + if has_version "<=sci-chemistry/gromacs-2022"; then + ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" + ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" + ewarn + ewarn "Feel free to mask newer versions if needed." + fi +} |