Added ebuild for xerial-core as a dependency for picard (#491816)

Package-Manager: portage-2.2.7/cvs/Linux x86_64
Manifest-Sign-Key: 0x77C501ED

4 files changed, 207 insertions, 2 deletions

diff --git a/dev-java/xerial-core/Manifest b/dev-java/xerial-core/Manifest
index 61887c25a56e..a3973aae0afc 100644
--- a/dev-java/xerial-core/Manifest
+++ b/dev-java/xerial-core/Manifest
@@ -1,5 +1,19 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA256
+
 AUX 2.0.1-build.xml 5674 SHA256 e1b0add0886ed01ff0223d4eb639adaf7e959dc88d41bfd10488e86d176ee530 SHA512 fe6cae55b06099f1718fe2d2b70f680b3549c20047884f879d4fcdc7f8765d4b18a5f8b80478b09913013958834f2602ded4e0b9580db96467d89b1bd5c23650 WHIRLPOOL e450d91abd978a4e76b846dc9fd7aba5cc62aa8892f6a47a0baae98ce729ea54e206eaecf2eef7b1b3235d050de04faf410834f2cf6944591f70c7122ccd0d4e
 DIST xerial-core-2.0.1.tar.bz2 519709 SHA256 18fc5948ef4007edeb8c373c4b28057f08aa20a3514ed257cf592ee8db7437a1 SHA512 39236e8a653301a6899ce80d3240d505e91f0cfc8878fa1a698113d06f3af3fd7adef540d72da1c0e1fb7101542c43e92fb9388243d95c3185a561532c18c6fb WHIRLPOOL 860729ac4badeff692f603cd6d0e31b21e3876833c9f6c9d4a31e0c9bd95e7ccef0c924477cf0fdf525877625ef24f66b3fe6183c484381d577bd4a56aa602e6
-EBUILD xerial-core-2.0.1.ebuild 930 SHA256 56709b37bf0e2c3e3fff554272647d116bb93763bc2b64c60af78bad67da8147 SHA512 ccaa5b880197bdff32f7a82d6d5c374dfffa3b7eb4012d475550d01b71ebba54b7cf9fb37da9042e4879e680e0d53f5fb02c8a4656ef48fa4323c0256f6f9551 WHIRLPOOL 099c0501b135358c91d2d2fbb3a609cc818417db41474979b8899ba5cf00a2cf73f0e578d5e41508bb44f9b6f8e0fc0c3f9be13e87c9fa79b9d7fc666b98a884
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+EBUILD xerial-core-2.0.1.ebuild 1036 SHA256 f05abef259d3d45b3c20c93e288a718d5896d554b0a96e5427860dea0b5e57c5 SHA512 087314fed4578949f4f8b6244cd3b1f5bd3b7572266321ccc32e36dcd1b7946a5a4cdfab54e3ff632788c0b3847db8c3d6a7106b8b8551076034d46a06696db3 WHIRLPOOL a13f3d7ec09f1dd665127b502fd3c224dc7fa35965b5faa007e5707eca001bc5db7b277c6aa9f72bae54b65d4acc0ecb6bb0177f72e99df8f603c57810d21575
+MISC ChangeLog 431 SHA256 efd213b4a10efd1553044c169095f6867a9ce0a5940fdd36b52e82bd6a9bd286 SHA512 996944e878b39b9058309ddb3647304e4274f6e929ad1015a7fcf0909dcacc211590887224c9ad5ed3fd5972bb57e98e0d03b4ae4cc8f2da6b864d2a4f54d6a1 WHIRLPOOL 821f0d5ea0cb3cde670af44cf53f34334247695194d6fe25fa8c1e2afa69d4c288b97770492f106246ead80063348571ce2741b6d3b1c57e4068b00340985a49
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diff --git a/dev-java/xerial-core/files/2.0.1-build.xml b/dev-java/xerial-core/files/2.0.1-build.xml
new file mode 100644
index 000000000000..76a6adfcb189
--- /dev/null
+++ b/dev-java/xerial-core/files/2.0.1-build.xml
@@ -0,0 +1,140 @@
+<?xml version="1.0" encoding="UTF-8"?>
+
+<project name="xerial-core-from-maven" default="package" basedir=".">
+	<property file="${user.home}/.m2/maven.properties" />
+	<property file="maven-build.properties" />
+
+	<property name="maven.build.finalName" value="xerial-core-2.0.1" />
+	<property name="maven.build.dir" value="target" />
+	<property name="maven.build.outputDir" value="${maven.build.dir}/classes" />
+	<property name="maven.build.srcDir.0" value="src/main/java" />
+	<property name="maven.build.resourceDir.0" value="src/main/java" />
+	<property name="maven.build.resourceDir.1" value="src/main/resources" />
+	<property name="maven.build.testOutputDir" value="${maven.build.dir}/test-classes" />
+	<property name="maven.build.testDir.0" value="src/test/java" />
+	<property name="maven.build.testResourceDir.0" value="src/test/java" />
+	<property name="maven.build.testResourceDir.1" value="src/test/resources" />
+	<property name="maven.test.reports" value="${maven.build.dir}/test-reports" />
+	<property name="maven.reporting.outputDirectory" value="${maven.build.dir}/site" />
+
+	<property name="maven.repo.local" value="${user.home}/.m2/repository" />
+	<property name="maven.settings.offline" value="false" />
+	<property name="maven.settings.interactiveMode" value="true" />
+
+	<path id="build.classpath" />
+	<path id="build.test.classpath" />
+
+	<target name="clean" description="Clean the output directory">
+		<delete dir="${maven.build.dir}" />
+	</target>
+
+
+	<target name="compile" description="Compile the code">
+		<mkdir dir="${maven.build.outputDir}" />
+		<javac destdir="${maven.build.outputDir}" nowarn="false" debug="true" optimize="false" deprecation="true" target="1.6" verbose="false" fork="false" source="1.6">
+			<src>
+				<pathelement location="${maven.build.srcDir.0}" />
+			</src>
+			<classpath refid="build.classpath" />
+		</javac>
+		<copy todir="${maven.build.outputDir}">
+			<fileset dir="${maven.build.resourceDir.0}">
+				<exclude name="**/*.java" />
+			</fileset>
+		</copy>
+	</target>
+
+
+	<target name="compile-tests" depends="compile" description="Compile the test code" unless="maven.test.skip">
+		<mkdir dir="${maven.build.testOutputDir}" />
+		<javac destdir="${maven.build.testOutputDir}" nowarn="false" debug="true" optimize="false" deprecation="true" target="1.6" verbose="false" fork="false" source="1.6">
+			<src>
+				<pathelement location="${maven.build.testDir.0}" />
+			</src>
+			<classpath>
+				<path refid="build.test.classpath" />
+				<pathelement location="${maven.build.outputDir}" />
+			</classpath>
+		</javac>
+		<copy todir="${maven.build.testOutputDir}">
+			<fileset dir="${maven.build.testResourceDir.0}">
+				<exclude name="**/*.java" />
+			</fileset>
+		</copy>
+		<copy todir="${maven.build.testOutputDir}">
+			<fileset dir="${maven.build.testResourceDir.1}" />
+		</copy>
+	</target>
+
+	<target name="test" depends="compile-tests, junit-missing" unless="junit.skipped" description="Run the test cases">
+		<mkdir dir="${maven.test.reports}" />
+		<junit printSummary="yes" haltonerror="true" haltonfailure="true" fork="true" dir=".">
+			<sysproperty key="basedir" value="." />
+			<formatter type="xml" />
+			<formatter type="plain" usefile="false" />
+			<classpath>
+				<path refid="build.test.classpath" />
+				<pathelement location="${maven.build.outputDir}" />
+				<pathelement location="${maven.build.testOutputDir}" />
+			</classpath>
+			<batchtest todir="${maven.test.reports}" unless="test">
+				<fileset dir="${maven.build.testDir.0}">
+					<include name="**/Test*.java" />
+					<include name="**/*Test.java" />
+					<include name="**/*TestCase.java" />
+					<exclude name="**/*Abstract*Test.java" />
+				</fileset>
+			</batchtest>
+			<batchtest todir="${maven.test.reports}" if="test">
+				<fileset dir="${maven.build.testDir.0}">
+					<include name="**/${test}.java" />
+					<exclude name="**/*Abstract*Test.java" />
+				</fileset>
+			</batchtest>
+		</junit>
+	</target>
+
+	<target name="test-junit-present">
+		<available classname="junit.framework.Test" property="junit.present" />
+	</target>
+
+	<target name="test-junit-status" depends="test-junit-present">
+		<condition property="junit.missing">
+			<and>
+				<isfalse value="${junit.present}" />
+				<isfalse value="${maven.test.skip}" />
+			</and>
+		</condition>
+		<condition property="junit.skipped">
+			<or>
+				<isfalse value="${junit.present}" />
+				<istrue value="${maven.test.skip}" />
+			</or>
+		</condition>
+	</target>
+
+	<target name="junit-missing" depends="test-junit-status" if="junit.missing">
+		<echo>=================================== WARNING ===================================</echo>
+		<echo> JUnit is not present in your $ANT_HOME/lib directory. Tests not executed.</echo>
+		<echo>===============================================================================</echo>
+	</target>
+
+	<target name="javadoc" description="Generates the Javadoc of the application">
+		<javadoc sourcepath="${maven.build.srcDir.0}" packagenames="*" destdir="${maven.reporting.outputDirectory}/apidocs" charset="ISO-8859-1" linksource="false" breakiterator="false">
+			<doctitle>&lt;![CDATA[xerial-core-2.0.1 API]]&gt;</doctitle>
+		</javadoc>
+	</target>
+
+	<target name="package" depends="compile,test" description="Package the application">
+		<jar jarfile="${maven.build.dir}/${maven.build.finalName}.jar" compress="true" index="false" basedir="${maven.build.outputDir}" excludes="**/package.html" />
+	</target>
+
+	<target name="jar" depends="package" description="Builds the jar for the application" />
+
+	<target name="test-offline">
+		<condition property="maven.mode.offline">
+			<equals arg1="${maven.settings.offline}" arg2="true" />
+		</condition>
+	</target>
+
+</project>
diff --git a/dev-java/xerial-core/metadata.xml b/dev-java/xerial-core/metadata.xml
new file mode 100644
index 000000000000..e39d18f86245
--- /dev/null
+++ b/dev-java/xerial-core/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<herd>java</herd>
+	<upstream>
+		<remote-id type="google-code">xerial</remote-id>
+	</upstream>
+</pkgmetadata>
+
diff --git a/dev-java/xerial-core/xerial-core-2.0.1.ebuild b/dev-java/xerial-core/xerial-core-2.0.1.ebuild
new file mode 100644
index 000000000000..12bab92512c5
--- /dev/null
+++ b/dev-java/xerial-core/xerial-core-2.0.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/dev-java/xerial-core/xerial-core-2.0.1.ebuild,v 1.1 2013/11/24 14:41:38 ercpe Exp $
+
+EAPI=5
+
+JAVA_PKG_IUSE="doc source test"
+
+inherit java-pkg-2 java-ant-2
+
+DESCRIPTION="An open-source DBMS for XML/JSON/Relational data"
+HOMEPAGE="https://code.google.com/p/xerial/"
+SRC_URI="http://dev.gentoo.org/~ercpe/distfiles/${CATEGORY}/${PN}/${P}.tar.bz2"
+
+LICENSE="Apache-2.0"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=">=virtual/jdk-1.6
+	test? ( dev-java/junit:4 )"
+RDEPEND=">=virtual/jre-1.6"
+
+JAVA_ANT_REWRITE_CLASSPATH="true"
+EANT_TEST_GENTOO_CLASSPATH="junit-4"
+EANT_TEST_ANT_TASKS="ant-junit"
+
+java_prepare() {
+	cp "${FILESDIR}"/${PV}-build.xml "${S}"/build.xml || die
+}
+
+src_install() {
+	java-pkg_newjar "${S}/target/${P}.jar" "${PN}.jar"
+
+	use source && java-pkg_dosrc "${S}"/src/main/java/*
+	use doc && java-pkg_dojavadoc "${S}"/target/site/apidocs
+}
+
+src_test() {
+	java-pkg-2_src_test
+}