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authorAndrey Kislyuk <weaver@gentoo.org>2010-04-18 23:41:06 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2010-04-18 23:41:06 +0000
commit29c80b03efa6a58b33e18165b77af42b09d28c90 (patch)
tree236396bcbd85c8c43b317d5a8185f7bdb2464fc9 /sci-biology/bfast
parentVersion bump, remove old. (diff)
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Version bump
Package-Manager: portage-2.2_rc67/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/bfast')
-rw-r--r--sci-biology/bfast/ChangeLog7
-rw-r--r--sci-biology/bfast/Manifest4
-rw-r--r--sci-biology/bfast/bfast-0.6.4b.ebuild35
3 files changed, 44 insertions, 2 deletions
diff --git a/sci-biology/bfast/ChangeLog b/sci-biology/bfast/ChangeLog
index 6633e6a83d5e..834b828f7a16 100644
--- a/sci-biology/bfast/ChangeLog
+++ b/sci-biology/bfast/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/bfast
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.1 2010/01/21 18:25:31 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.2 2010/04/18 23:41:05 weaver Exp $
+
+*bfast-0.6.4b (18 Apr 2010)
+
+ 18 Apr 2010; Andrey Kislyuk <weaver@gentoo.org> +bfast-0.6.4b.ebuild:
+ Version bump
*bfast-0.6.2a (21 Jan 2010)
diff --git a/sci-biology/bfast/Manifest b/sci-biology/bfast/Manifest
index 5b82c058ce80..bcc3495bd158 100644
--- a/sci-biology/bfast/Manifest
+++ b/sci-biology/bfast/Manifest
@@ -1,4 +1,6 @@
DIST bfast-0.6.2a.tar.gz 2453822 RMD160 5efdb29b91500bbfd86618780c9f98ecb87e1934 SHA1 d80d0b57c7584c7c080e9d963eac2d210343626c SHA256 083b2fa641f701e0f3a7d54bf36a89b94b02e4f7bd046a6d860c1dd72447d6dd
+DIST bfast-0.6.4b.tar.gz 2459578 RMD160 bb2ac55082be519bce9d240cea643be9ba96c920 SHA1 3b51f0b29ad86797e2cf1ea4cb9f93809a80c575 SHA256 0b6c79826261b2e5353f115d96dcd338c9f22926fd4a9c107012dba466b1f096
EBUILD bfast-0.6.2a.ebuild 974 RMD160 401a61be457de01e61b7398451d6a5e992b9c323 SHA1 4e670faeda2e5c2abbbf17ca7f12f1ab4cebcb8e SHA256 435e5f2dd465847bf1365479939b3575e0e590c91ec4ee947657d829c3a3bde9
-MISC ChangeLog 362 RMD160 04ec02086ac09696e1e621fca0812ef8b19b245c SHA1 19feb96317db3932cdfec08e95a2b055d9816498 SHA256 ff433c5cc17dc22fd1d435261c9156f0588b888d87beaa064ab0f4ac519c8617
+EBUILD bfast-0.6.4b.ebuild 788 RMD160 5c6ec30efb0ccfabffee82d2a8df02f6950c8a0a SHA1 76a04c08e581b977560f5152ac536de4306aabfa SHA256 bfb73937d3806bb280d05bea77e1c28fe9a6fe0c5418624bca14e02a84528ab3
+MISC ChangeLog 479 RMD160 1a8d15e68e67709a48c70d97225e6685d441c112 SHA1 97663931d23f832250f200f3da6777f57ba53825 SHA256 dd65fc8971e57bfc3cb6f67b69f30bf5d037f08ab67383b0cfeb1a5427ae50cc
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/bfast/bfast-0.6.4b.ebuild b/sci-biology/bfast/bfast-0.6.4b.ebuild
new file mode 100644
index 000000000000..ee98c04b74b9
--- /dev/null
+++ b/sci-biology/bfast/bfast-0.6.4b.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.4b.ebuild,v 1.1 2010/04/18 23:41:06 weaver Exp $
+
+EAPI="2"
+
+inherit autotools
+
+DESCRIPTION="Blat-like Fast Accurate Search Tool"
+HOMEPAGE="https://sourceforge.net/projects/bfast/"
+SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND="dev-perl/XML-Simple"
+
+src_prepare() {
+ sed -i -e 's/-m64//' \
+ -e 's/CFLAGS="${default_CFLAGS} ${extended_CFLAGS}"/CFLAGS="${CFLAGS} ${default_CFLAGS} ${extended_CFLAGS}"/' \
+ configure.ac || die
+ eautoreconf
+}
+
+src_install() {
+ einstall || die
+ dodoc AUTHORS NEWS README
+}
+
+src_test() {
+ emake check || die
+}