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authorJustin Lecher <jlec@gentoo.org>2011-03-20 20:32:09 +0000
committerJustin Lecher <jlec@gentoo.org>2011-03-20 20:32:09 +0000
commit32d3eeaf7392c1dcfef7d6d792e91f6b3157a51f (patch)
treef74c4fe37916d3a20254916ea221c365beca3aa9 /sci-biology/vienna-rna
parentx11-libs/fltk SLOTMOVE 1.1 -> 1, corrected ebuild accordingly (diff)
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Install Perl modules into vendor-dir, #349772
Package-Manager: portage-2.2.0_alpha28/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/vienna-rna')
-rw-r--r--sci-biology/vienna-rna/ChangeLog6
-rw-r--r--sci-biology/vienna-rna/Manifest14
-rw-r--r--sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild3
-rw-r--r--sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild3
-rw-r--r--sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild3
5 files changed, 18 insertions, 11 deletions
diff --git a/sci-biology/vienna-rna/ChangeLog b/sci-biology/vienna-rna/ChangeLog
index cc3ae6c7df59..a8f3e2425b32 100644
--- a/sci-biology/vienna-rna/ChangeLog
+++ b/sci-biology/vienna-rna/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/vienna-rna
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.35 2011/03/20 12:15:50 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.36 2011/03/20 20:32:09 jlec Exp $
+
+ 20 Mar 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4-r1.ebuild,
+ vienna-rna-1.8.4-r2.ebuild, vienna-rna-1.8.5.ebuild:
+ Install Perl modules into vendor-dir, #349772
*vienna-rna-1.8.5 (20 Mar 2011)
diff --git a/sci-biology/vienna-rna/Manifest b/sci-biology/vienna-rna/Manifest
index 5ac721275950..8e176ce94951 100644
--- a/sci-biology/vienna-rna/Manifest
+++ b/sci-biology/vienna-rna/Manifest
@@ -11,15 +11,15 @@ AUX vienna-rna-1.8.4-jobserver-fix.patch 681 RMD160 c72649a57ece3d511cc18f2cac47
AUX vienna-rna-1.8.4-overflows.patch 740 RMD160 ec5f8a0f22eb7ddc845d515cd7896e90d31ecdbd SHA1 084eea746bf2ae44775063397baa2f9314a05bde SHA256 cd977c5acfca05890768893ab5e18fca5fee167dac341e0edd16bc4fd7cd2a08
DIST ViennaRNA-1.8.4.tar.gz 1397733 RMD160 29939511e560d898164c21d2452316b0a3a6771e SHA1 6e3a0751849f1b43d4751ce64670a21a3718f040 SHA256 90a5408d05f7dd35031a527d1823607daa8fc8f394b438fb072be78afc7174b7
DIST ViennaRNA-1.8.5.tar.gz 1306792 RMD160 5c67030f4e9ff2f5d8c4595178c030781f3a2e56 SHA1 c20dd5ffa6d46ea48de5dd1f3d5e6eff8ae2d385 SHA256 f4e2d94beaf77165e8321758e4ab0ad1c5d49879cefa12e48b07d09ed2d0ecf9
-EBUILD vienna-rna-1.8.4-r1.ebuild 2388 RMD160 54055b0e3c32047f18a0d5a495062d7ac60b1ee4 SHA1 ab7741045246a0c6d8ef7850f18f2214144c3096 SHA256 d5c4dffbd110ea0554d04602fcb0520f77f3fc087bf33272432454bcfc3e3a4a
-EBUILD vienna-rna-1.8.4-r2.ebuild 2258 RMD160 5ccabec4d753a975e02635e4613af453a3d101ce SHA1 c1b57e876319787f8e90f0c064e0c1a1a640681c SHA256 81102e45751d57f68bb83821bacc5acd3e7f22a10a05b84f616f9a4ede802570
-EBUILD vienna-rna-1.8.5.ebuild 2215 RMD160 dc81764bb321aa4e66cda6fe89559d9fe7e937e1 SHA1 13d9f7f6b6e498212c940225d8fc046ce29baced SHA256 42be75f81cc0d5a08bd5aa99168ce0405615dbc2737a0e447d1d8939a90f8aeb
-MISC ChangeLog 5670 RMD160 0e559647aafb2fa8c5577318e323494b0f26fc92 SHA1 1f5c7f83f8eb4565df0fc8ef15899fe370e01ae2 SHA256 cbbac12aab6b6d0f436b86b00c306c16052602c5418b7b4a3fffffbf448bc160
+EBUILD vienna-rna-1.8.4-r1.ebuild 2468 RMD160 6387fa11fa9278b537a6837a698b3b5d9499e079 SHA1 4c0381decae077e485a69ad4e44ddc013dd66174 SHA256 ee60fe00e65ade7cce7fe7b039fe3d2ad3ab960dcff2cd5ada4388804a17e73e
+EBUILD vienna-rna-1.8.4-r2.ebuild 2338 RMD160 d190f65fccb687f499f10f9e3b6b64626933f645 SHA1 fa5a38377f1481748fb83acf2be9658de9a99cee SHA256 e762b0a04f2288f0c767f888d874c8ef0abcb722999f619398be2b2516fd1959
+EBUILD vienna-rna-1.8.5.ebuild 2295 RMD160 269bc0056204bb79b1abe8d63b7cf8d9e780cc2e SHA1 f1d966fa374a34ac9ecab0d5fd43944143b3a90c SHA256 4410f366daac744049d0edf295a49c99d05af3aaf57afa34bf09131e23a92f9f
+MISC ChangeLog 5849 RMD160 af5ed4a66ed9ef4673f5533c2c0f1b911765fd06 SHA1 58d4f37bc6264e89a52b80ffa28036d7f2536b1a SHA256 9f1fa27cf4b2929d971920687ae9398ae8f931156b9e1026cb7796a1d3221fcf
MISC metadata.xml 1210 RMD160 41d50f7af8428b196c4ef855b68dcb657588bb34 SHA1 08f8e1aa88086fd9a3f5fa03fa46c31e12a3f776 SHA256 9c8b3f60f6098accff7c67f26ea07cb5b57e9ed8eae5d3d03949f1718ab6517e
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.17 (GNU/Linux)
-iEYEARECAAYFAk2F7/0ACgkQgAnW8HDreRbS6QCgkxl2Kxumk6mnUqWcT504jzRM
-OHIAoMJF0B3xXepnSxW1IyGwvYbzUQXb
-=IvWr
+iEYEARECAAYFAk2GZE8ACgkQgAnW8HDreRY1CgCfXjseoh3Io5WpvP/Olqw/utSl
+uC4AniHz9QvDC+t9x4Q5pGZf9/aOoHSD
+=tnL7
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diff --git a/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild b/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild
index 03f87f752f23..51eaa1a6187f 100644
--- a/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild
+++ b/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild,v 1.4 2011/03/20 12:15:50 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.4-r1.ebuild,v 1.5 2011/03/20 20:32:09 jlec Exp $
EAPI="2"
@@ -35,6 +35,7 @@ src_prepare() {
base_src_prepare
sed -i 's/ getline/ v_getline/' Readseq/ureadseq.c || die
sed -i '1 i #include <cstdio>' RNAforester/src/rnafuncs.cpp || die
+ sed -i 's/@PerlCmd@ Makefile.PL/& INSTALLDIRS=vendor/' Perl/Makefile.am || die
eautoreconf
(cd RNAforester; eautoreconf)
diff --git a/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild b/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild
index 7821e390c2d6..84f8fb36ab68 100644
--- a/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild
+++ b/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild,v 1.2 2011/03/20 12:15:50 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.4-r2.ebuild,v 1.3 2011/03/20 20:32:09 jlec Exp $
EAPI="2"
@@ -37,6 +37,7 @@ src_prepare() {
base_src_prepare
sed -i 's/ getline/ v_getline/' Readseq/ureadseq.c || die
sed -i '1 i #include <cstdio>' RNAforester/src/rnafuncs.cpp || die
+ sed -i 's/@PerlCmd@ Makefile.PL/& INSTALLDIRS=vendor/' Perl/Makefile.am || die
eautoreconf
cd RNAforester && eautoreconf
diff --git a/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild b/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
index c31ba770d710..b3264d75e9d4 100644
--- a/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
+++ b/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.1 2011/03/20 12:15:50 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.2 2011/03/20 20:32:09 jlec Exp $
EAPI="2"
@@ -36,6 +36,7 @@ PATCHES=(
src_prepare() {
base_src_prepare
sed -i 's/ getline/ v_getline/' Readseq/ureadseq.c || die
+ sed -i 's/@PerlCmd@ Makefile.PL/& INSTALLDIRS=vendor/' Perl/Makefile.am || die
eautoreconf
cd RNAforester && eautoreconf