New version

Package-Manager: portage-2.0.51.22-r3

4 files changed, 59 insertions, 2 deletions

diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog
index d77312913a26..b75f0a4a7d87 100644
--- a/sci-biology/t-coffee/ChangeLog
+++ b/sci-biology/t-coffee/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/t-coffee
 # Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.9 2005/10/19 23:54:54 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.10 2005/12/08 19:25:02 ribosome Exp $
+
+*t-coffee-3.27 (08 Dec 2005)
+
+  08 Dec 2005; Olivier Fisette <ribosome@gentoo.org> +t-coffee-3.27.ebuild:
+  New version.
 
 *t-coffee-3.18 (19 Oct 2005)
 
diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest
index d2cf7eb83337..c17816868340 100644
--- a/sci-biology/t-coffee/Manifest
+++ b/sci-biology/t-coffee/Manifest
@@ -1,6 +1,8 @@
 MD5 6fb318682c83d5a0f5d956f5272a66c6 t-coffee-2.66.ebuild 1142
+MD5 7b47dc37d7c3dfdfcb04be19fcfef857 t-coffee-3.27.ebuild 1478
 MD5 5ce8de4bef54a9ec4985afe372813566 t-coffee-3.18.ebuild 1478
-MD5 4316c00d993b42f6191d12059c0be8a0 ChangeLog 1543
+MD5 b6653089ee0949b6e969b2b2483b738f ChangeLog 1666
 MD5 0bbfd32ca9864625c55ab6460dbbd963 metadata.xml 755
 MD5 ed78ff61d489ff54debcffde53dca64e files/digest-t-coffee-2.66 87
 MD5 1b980450cd09068868ab6fc2868cd19e files/digest-t-coffee-3.18 87
+MD5 7a6ff5d9984814b20d79e15e0e300b63 files/digest-t-coffee-3.27 87
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-3.27 b/sci-biology/t-coffee/files/digest-t-coffee-3.27
new file mode 100644
index 000000000000..2eb2b6698379
--- /dev/null
+++ b/sci-biology/t-coffee/files/digest-t-coffee-3.27
@@ -0,0 +1 @@
+MD5 747d907f4b87e07d7b1e670a2b263e23 T-COFFEE_distribution_Version_3.27.tar.gz 1295287
diff --git a/sci-biology/t-coffee/t-coffee-3.27.ebuild b/sci-biology/t-coffee/t-coffee-3.27.ebuild
new file mode 100644
index 000000000000..69e37e948cf2
--- /dev/null
+++ b/sci-biology/t-coffee/t-coffee-3.27.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-3.27.ebuild,v 1.1 2005/12/08 19:25:02 ribosome Exp $
+
+inherit toolchain-funcs
+
+DESCRIPTION="A multiple sequence alignment package"
+LICENSE="t-coffee"
+HOMEPAGE="http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html"
+SRC_URI="http://igs-server.cnrs-mrs.fr/~cnotred/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~ppc ~x86"
+
+RESTRICT="nomirror"
+
+DEPEND="sci-biology/clustalw"
+
+TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}"
+S="${TCDIR}/t_coffee_source"
+
+src_unpack(){
+	unpack ${A}
+	cd "${S}"
+	sed -e "s/CC	= cc/CC	= $(tc-getCC) ${CFLAGS}/" -i makefile || die \
+		"Failed to patch makefile."
+}
+
+src_compile() {
+	make all || die "Compilation failed."
+}
+
+src_install() {
+	cd "${TCDIR}"/bin
+	dobin t_coffee || die "Failed to install program."
+	insinto /usr/share/${PN}/lib/html
+	doins ${TCDIR}/html/* || die "Failed to install HTML documentation,"
+
+	dodoc ${TCDIR}/doc/README4T-COFFEE || die \
+		"Failed to install basic documentation."
+	insinto /usr/share/doc/${PF}
+	doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} || die \
+		"Failed to install manuals and articles."
+	doins ${TCDIR}/doc/*.txt || die "Failed to install documentation."
+
+	insinto /usr/share/${PN}/example
+	doins ${TCDIR}/example/* || die "Failed to install example files."
+}