diff options
| -rw-r--r-- | sci-chemistry/caver/ChangeLog | 12 | ||||
| -rw-r--r-- | sci-chemistry/caver/Manifest | 4 | ||||
| -rw-r--r-- | sci-chemistry/caver/caver-0.99.1.ebuild | 49 | ||||
| -rw-r--r-- | sci-chemistry/caver/files/digest-caver-0.99.1 | 2 | ||||
| -rw-r--r-- | sci-chemistry/caver/metadata.xml | 9 |
5 files changed, 76 insertions, 0 deletions
diff --git a/sci-chemistry/caver/ChangeLog b/sci-chemistry/caver/ChangeLog new file mode 100644 index 000000000000..1cd00b2ff2dd --- /dev/null +++ b/sci-chemistry/caver/ChangeLog @@ -0,0 +1,12 @@ +# ChangeLog for sci-chemistry/caver +# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/ChangeLog,v 1.1 2005/12/20 03:56:38 spyderous Exp $ + +*caver-0.99.1 (20 Dec 2005) + + 20 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml, + +caver-0.99.1.ebuild: + New package providing rapid, accurate and fully automated calculation of + pathways leading from buried cavities to outside solvent in static and + dynamic protein structures. Also has a neat PyMol plugin. + diff --git a/sci-chemistry/caver/Manifest b/sci-chemistry/caver/Manifest new file mode 100644 index 000000000000..c9d229267e6f --- /dev/null +++ b/sci-chemistry/caver/Manifest @@ -0,0 +1,4 @@ +MD5 8ce02fd5913949883e8686e441725d75 ChangeLog 546 +MD5 bb4a1218e09746c04c1f3da50f76eb66 caver-0.99.1.ebuild 1382 +MD5 946c4f9350e2386e497befe7afbe9cc2 files/digest-caver-0.99.1 130 +MD5 af1bfbb0777267a03e889b08173f2757 metadata.xml 248 diff --git a/sci-chemistry/caver/caver-0.99.1.ebuild b/sci-chemistry/caver/caver-0.99.1.ebuild new file mode 100644 index 000000000000..737c2859a97a --- /dev/null +++ b/sci-chemistry/caver/caver-0.99.1.ebuild @@ -0,0 +1,49 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/caver-0.99.1.ebuild,v 1.1 2005/12/20 03:56:38 spyderous Exp $ + +inherit multilib python + +MY_PN="${PN}_unix" +MY_P="${MY_PN}_v${PV}" +DESCRIPTION="Rapid, accurate and fully automated calculation of pathways leading from buried cavities to outside solvent in static and dynamic protein structures" +HOMEPAGE="http://viper.chemi.muni.cz/caver/" +SRC_URI="${MY_P}.tar.gz + pymol? ( pymolplug.tar.gz )" +LICENSE="CAVER" +SLOT="0" +KEYWORDS="~x86" +IUSE="pymol" +RDEPEND="media-libs/qhull + pymol? ( sci-chemistry/pymol )" +DEPEND="${RDEPEND}" +RESTRICT="fetch" +S="${WORKDIR}/${MY_P}" + +pkg_nofetch() { + einfo "Download ${MY_P}.tar.gz" + if use pymol; then + einfo "and pymolplug.tar.gz" + fi + einfo "from ${HOMEPAGE}. This requires registration." + einfo "Place them in ${DISTDIR}." +} + +src_install() { + make DESTDIR="${D}" install + if use pymol; then + python_version + sed -i \ + -e "s:^\(CAVER_BINARY_LOCATION\).*:\1 = \"${ROOT}usr/bin/caver\":g" \ + ${WORKDIR}/pymolplug/caver.py + insinto /usr/$(get_libdir)/python${PYVER}/site-packages/pmg_tk/startup + doins ${WORKDIR}/pymolplug/caver.py + fi +} + +pkg_postinst() { + if use pymol; then + python_mod_compile \ + /usr/$(get_libdir)/python${PYVER}/site-packages/pmg_tk/startup/caver.py + fi +} diff --git a/sci-chemistry/caver/files/digest-caver-0.99.1 b/sci-chemistry/caver/files/digest-caver-0.99.1 new file mode 100644 index 000000000000..80f3e372b61f --- /dev/null +++ b/sci-chemistry/caver/files/digest-caver-0.99.1 @@ -0,0 +1,2 @@ +MD5 7dfc10f67d345d81fa74f0c2c8bbca8d caver_unix_v0.99.1.tar.gz 898765 +MD5 522581ce929adb5d3bef0fa540382362 pymolplug.tar.gz 81137 diff --git a/sci-chemistry/caver/metadata.xml b/sci-chemistry/caver/metadata.xml new file mode 100644 index 000000000000..211b8bd0f0a4 --- /dev/null +++ b/sci-chemistry/caver/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<maintainer> +<email>spyderous@gentoo.org</email> +<name>Donnie Berkholz</name> +</maintainer> +</pkgmetadata> |