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-rw-r--r--sci-biology/aaindex/ChangeLog5
-rw-r--r--sci-biology/aaindex/aaindex-6.0.ebuild50
-rw-r--r--sci-biology/aaindex/files/digest-aaindex-6.05
3 files changed, 4 insertions, 56 deletions
diff --git a/sci-biology/aaindex/ChangeLog b/sci-biology/aaindex/ChangeLog
index 68890b2c515d..aa301bb94eae 100644
--- a/sci-biology/aaindex/ChangeLog
+++ b/sci-biology/aaindex/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/aaindex
# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.15 2006/01/14 09:40:12 grobian Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.16 2006/01/21 17:23:18 ribosome Exp $
+
+ 21 Jan 2006; Olivier Fisette <ribosome@gentoo.org> -aaindex-6.0.ebuild:
+ Removed obsolete version.
14 Jan 2006; Fabian Groffen <grobian@gentoo.org> aaindex-7.0.ebuild:
Marked ppc-macos stable for bug #115449
diff --git a/sci-biology/aaindex/aaindex-6.0.ebuild b/sci-biology/aaindex/aaindex-6.0.ebuild
deleted file mode 100644
index 38f88099a274..000000000000
--- a/sci-biology/aaindex/aaindex-6.0.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-6.0.ebuild,v 1.10 2005/11/19 18:22:36 blubb Exp $
-
-DESCRIPTION="Amino acid indices and similarity matrices"
-HOMEPAGE="http://www.genome.ad.jp/aaindex"
-SRC_URI="ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/${PN}.doc
- ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/${PN}1
- ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/${PN}2
- ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/list_of_matrices
- ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/list_of_indices"
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
-IUSE="emboss minimal"
-# Minimal build keeps only the indexed files (if applicable) and the documentation.
-# The non-indexed database is not installed.
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-S=${WORKDIR}
-
-src_unpack() {
- echo
- einfo "No archive to unpack."
- echo
-}
-
-src_compile() {
- if use emboss; then
- mkdir AAINDEX
- echo
- einfo "Indexing AAindex for usage with EMBOSS."
- EMBOSS_DATA=. aaindexextract -auto -infile ${DISTDIR}/${PN}1 || die \
- "Indexing AAindex failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins ${DISTDIR}/{${PN}{1,2},list_of_{matrices,indices}}
- fi
- dodoc ${DISTDIR}/${PN}.doc
- if use emboss; then
- insinto /usr/share/EMBOSS/data/AAINDEX
- doins AAINDEX/*
- fi
-}
diff --git a/sci-biology/aaindex/files/digest-aaindex-6.0 b/sci-biology/aaindex/files/digest-aaindex-6.0
deleted file mode 100644
index c864f17ccc82..000000000000
--- a/sci-biology/aaindex/files/digest-aaindex-6.0
+++ /dev/null
@@ -1,5 +0,0 @@
-MD5 313ec8e18370195b58a95e6524c858ff aaindex.doc 6190
-MD5 90b5841a3d3c077b3e6b1ebb7781265b aaindex1 428020
-MD5 9ea0047f2727adf76285fc296d51594a aaindex2 195457
-MD5 74abb4c58caa1cb917b407cd6d05a18c list_of_matrices 6900
-MD5 4146e937362ee420ea32544ea2c8df2a list_of_indices 37549