1 files changed, 65 insertions, 0 deletions
diff --git a/sci-chemistry/ccp4-apps/files/6.1.3-pythonpath.patch b/sci-chemistry/ccp4-apps/files/6.1.3-pythonpath.patch
new file mode 100644
index 000000000000..7a012be6ef02
--- /dev/null
+++ b/sci-chemistry/ccp4-apps/files/6.1.3-pythonpath.patch
@@ -0,0 +1,65 @@
+diff --git a/ccp4-6.1.2/include/ccp4.setup-bash b/ccp4-6.1.2/include/ccp4.setup-bash
+index 9848101..cea8ae6 100755
+--- a/ccp4-6.1.2/include/ccp4.setup-bash
++++ b/ccp4-6.1.2/include/ccp4.setup-bash
+@@ -188,9 +188,9 @@ fi
+ #Python path for the subprocess fixed module
+ 
+ if [ $ccp4_first_in_path -eq 1 ]; then
+-    setenv PYTHONPATH ${CCP4}/share/python:${PYTHONPATH}
++    setenv PYTHONPATH ${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python:${PYTHONPATH}
+ else
+-    setenv PYTHONPATH ${PYTHONPATH}:${CCP4}/share/python
++    setenv PYTHONPATH ${PYTHONPATH}:${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python
+ fi
+ 
+ ### PLOT_COMMAND PRINT_COMMAND for the XCCPJIFFY programs to compile ###
+diff --git a/ccp4-6.1.2/include/ccp4.setup-csh b/ccp4-6.1.2/include/ccp4.setup-csh
+index 42f0820..93c2cf3 100755
+--- a/ccp4-6.1.2/include/ccp4.setup-csh
++++ b/ccp4-6.1.2/include/ccp4.setup-csh
+@@ -180,9 +180,9 @@ endif
+ #Python path for the subprocess fixed module
+ if (${?PYTHONPATH}) then
+   if ($ccp4_first_in_path) then
+-      setenv PYTHONPATH ${CCP4}/share/python:${PYTHONPATH}
++      setenv PYTHONPATH ${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python:${PYTHONPATH}
+   else
+-      setenv PYTHONPATH ${PYTHONPATH}:${CCP4}/share/python
++      setenv PYTHONPATH ${PYTHONPATH}:${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python
+   endif
+ else
+     setenv PYTHONPATH ${CCP4}/share/python
+diff --git a/ccp4-6.1.2/include/ccp4.setup-sh b/ccp4-6.1.2/include/ccp4.setup-sh
+index 4396ebf..a0455bd 100755
+--- a/ccp4-6.1.2/include/ccp4.setup-sh
++++ b/ccp4-6.1.2/include/ccp4.setup-sh
+@@ -228,9 +228,9 @@ test -r $CCP4/include/ccp4.msg && cat $CCP4/include/ccp4.msg
+ #Python path for the subprocess fixed module
+ 
+ if test $ccp4_first_in_path -eq 1; then
+-    export PYTHONPATH=${CCP4}/share/python:${PYTHONPATH}
++    export PYTHONPATH=${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python:${PYTHONPATH}
+ else
+-    export PYTHONPATH=${PYTHONPATH}:${CCP4}/share/python
++    export PYTHONPATH=${PYTHONPATH}:${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python
+ fi
+ 
+ ################### THE REST SHOULDN'T NEED EDITING #####################
+diff --git a/ccp4-6.1.2/include/ccp4.setup-zsh b/ccp4-6.1.2/include/ccp4.setup-zsh
+index 0e5c2ce..53523f3 100755
+--- a/ccp4-6.1.2/include/ccp4.setup-zsh
++++ b/ccp4-6.1.2/include/ccp4.setup-zsh
+@@ -157,10 +157,10 @@ export CLASSPATH
+ #Python path for the subprocess fixed module
+ 
+ if ($ccp4_first_in_path) then
+-    PYTHONPATH=${CCP4}/share/python:${PYTHONPATH}
++    PYTHONPATH=${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python:${PYTHONPATH}
+     export PYTHONPATH
+ else
+-    PYTHONPATH=${PYTHONPATH}:${CCP4}/share/python
++    PYTHONPATH=${PYTHONPATH}:${CCP4}/share/ccp4/smartie:${CCP4I_TOP}/python
+     export PYTHONPATH
+ fi
+